RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W PEX31P53203 462 aa2.57□□□□□ -2
SRL1YOR247W YLR152CP54072 576 aa2.57□□□□□ -2
SRL1YOR247W YDR209CQ03480 137 aa2.57□□□□□ -2
SRL1YOR247W OST6Q03723 332 aa2.57□□□□□ -2
SRL1YOR247W YML018CQ03730 393 aa2.57□□□□□ -2
SRL1YOR247W UTP15Q04305 513 aaKnown RBP2.57□□□□□ -2
SRL1YOR247W API2Q04413 109 aa2.57□□□□□ -2
SRL1YOR247W SEC13Q04491 297 aaKnown RBP2.57□□□□□ -2
SRL1YOR247W ARC18Q05933 178 aaKnown RBP2.57□□□□□ -2
SRL1YOR247W PAM18Q07914 168 aa2.57□□□□□ -2
SRL1YOR247W CBP6P07253 162 aaPredicted RBP2.56□□□□□ -2
SRL1YOR247W POF1P25576 258 aa2.56□□□□□ -2
SRL1YOR247W LDB16P25587 256 aa2.56□□□□□ -2
SRL1YOR247W ARO4P32449 370 aaKnown RBP2.56□□□□□ -2
SRL1YOR247W AIM29P36154 155 aa2.56□□□□□ -2
SRL1YOR247W SMP1P38128 452 aa2.56□□□□□ -2
SRL1YOR247W BFR1P38934 470 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SRL1YOR247W KRE29P40026 464 aa2.56□□□□□ -2
SRL1YOR247W YFL064CP43540 174 aa2.56□□□□□ -2
SRL1YOR247W YJR012CP47087 207 aa2.56□□□□□ -2
SRL1YOR247W TPN1P53099 579 aa2.56□□□□□ -2
SRL1YOR247W MNT4P53745 580 aa2.56□□□□□ -2
SRL1YOR247W RNY1Q02933 434 aaKnown RBP2.56□□□□□ -2
SRL1YOR247W INP1Q03694 420 aa2.56□□□□□ -2
SRL1YOR247W KRE28Q04431 385 aa2.56□□□□□ -2
SRL1YOR247W SEC10Q06245 871 aa2.56□□□□□ -2
SRL1YOR247W YOR114WQ12219 294 aa2.56□□□□□ -2
SRL1YOR247W ATG31Q12421 196 aa2.56□□□□□ -2
SRL1YOR247W YBL111CQ3E7Y5 667 aa2.56□□□□□ -2
SRL1YOR247W YAL064W-BO13512 126 aa2.55□□□□□ -2
SRL1YOR247W RPS3P05750 240 aaKnown RBP2.55□□□□□ -2
SRL1YOR247W REV1P12689 985 aa2.55□□□□□ -2
SRL1YOR247W PCL1P24867 279 aa2.55□□□□□ -2
SRL1YOR247W PEX3P28795 441 aa2.55□□□□□ -2
SRL1YOR247W VPH2P32341 215 aa2.55□□□□□ -2
SRL1YOR247W ALK2P32789 676 aaPredicted RBP2.55□□□□□ -2
SRL1YOR247W GPX1P36014 167 aa2.55□□□□□ -2
SRL1YOR247W MRPL3P36516 390 aa2.55□□□□□ -2
SRL1YOR247W MRPL27P36526 146 aaPredicted RBP2.55□□□□□ -2
SRL1YOR247W MRP21P38175 177 aa2.55□□□□□ -2
SRL1YOR247W PRS2P38620 318 aaKnown RBP2.55□□□□□ -2
SRL1YOR247W RRT13P40042 185 aa2.55□□□□□ -2
SRL1YOR247W YER085CP40058 173 aa2.55□□□□□ -2
SRL1YOR247W IBA57P47158 497 aa2.55□□□□□ -2
SRL1YOR247W LIF1P53150 421 aa2.55□□□□□ -2
SRL1YOR247W YLR283WQ05867 314 aa2.55□□□□□ -2
SRL1YOR247W YOL029CQ08187 201 aa2.55□□□□□ -2
SRL1YOR247W YPL278CQ08990 100 aa2.55□□□□□ -2
SRL1YOR247W YDR018CQ12185 396 aa2.55□□□□□ -2
SRL1YOR247W YOR029WQ12243 111 aa2.55□□□□□ -2
SRL1YOR247W SME1Q12330 94 aaPredicted RBP2.55□□□□□ -2
SRL1YOR247W TRM10Q12400 293 aa2.55□□□□□ -2
SRL1YOR247W YMR316C-AI2HB70 103 aa2.54□□□□□ -2
SRL1YOR247W PET494P07390 489 aaPredicted RBP2.54□□□□□ -2
SRL1YOR247W CDC42P19073 191 aa2.54□□□□□ -2
SRL1YOR247W VPS3P23643 1011 aa2.54□□□□□ -2
SRL1YOR247W RNA15P25299 296 aaPredicted RBP2.54□□□□□ -2
SRL1YOR247W IMP1P28627 190 aa2.54□□□□□ -2
SRL1YOR247W MSN4P33749 630 aa2.54□□□□□ -2
SRL1YOR247W BMH2P34730 273 aaKnown RBP2.54□□□□□ -2
SRL1YOR247W FRM2P37261 193 aa2.54□□□□□ -2
SRL1YOR247W PRP24P49960 444 aaKnown RBP2.54□□□□□ -2
SRL1YOR247W YGL118CP53132 145 aa2.54□□□□□ -2
SRL1YOR247W YNL040WP53960 456 aaPredicted RBP2.54□□□□□ -2
SRL1YOR247W VPS60Q03390 229 aa2.54□□□□□ -2
SRL1YOR247W SGT2Q12118 346 aaKnown RBP2.54□□□□□ -2
SRL1YOR247W MSH5Q12175 901 aa2.54□□□□□ -2
SRL1YOR247W RAX2Q12465 1220 aa2.54□□□□□ -2
SRL1YOR247W YOS9Q99220 542 aa2.54□□□□□ -2
SRL1YOR247W TPI1P00942 248 aaKnown RBP2.53□□□□□ -2
SRL1YOR247W CAM1P29547 415 aaKnown RBP2.53□□□□□ -2
SRL1YOR247W KRE6P32486 720 aa2.53□□□□□ -2
SRL1YOR247W PRS1P32895 427 aaKnown RBP2.53□□□□□ -2
SRL1YOR247W ZRT3P34240 503 aa2.53□□□□□ -2
SRL1YOR247W UTH1P36135 365 aa2.53□□□□□ -2
SRL1YOR247W MRX3P38172 270 aa2.53□□□□□ -2
SRL1YOR247W YBR062CP38239 180 aa2.53□□□□□ -2
SRL1YOR247W MBA1P38300 278 aa2.53□□□□□ -2
SRL1YOR247W SEN34P39707 275 aa2.53□□□□□ -2
SRL1YOR247W EDC2P40023 145 aaPredicted RBP2.53□□□□□ -2
SRL1YOR247W MAL13P53338 473 aa2.53□□□□□ -2
SRL1YOR247W YMR244WQ04018 355 aa2.53□□□□□ -2
SRL1YOR247W CSM4Q08955 156 aa2.53□□□□□ -2
SRL1YOR247W YAL067W-AQ8TGK6 75 aa2.53□□□□□ -2
SRL1YOR247W RPS19AP07280 144 aaKnown RBP2.52□□□□□ -2.01
SRL1YOR247W RPS19BP07281 144 aaPredicted RBP2.52□□□□□ -2.01
SRL1YOR247W RPL4AP10664 362 aaKnown RBP2.52□□□□□ -2.01
SRL1YOR247W DED81P38707 554 aaKnown RBP2.52□□□□□ -2.01
SRL1YOR247W ASP1P38986 381 aaPredicted RBP2.52□□□□□ -2.01
SRL1YOR247W RTR1P40084 226 aaPredicted RBP2.52□□□□□ -2.01
SRL1YOR247W RRG9P40156 214 aa2.52□□□□□ -2.01
SRL1YOR247W UFE1P41834 346 aa2.52□□□□□ -2.01
SRL1YOR247W YFL012WP43580 148 aa2.52□□□□□ -2.01
SRL1YOR247W RPL4BP49626 362 aaKnown RBP2.52□□□□□ -2.01
SRL1YOR247W CDC14Q00684 551 aa2.52□□□□□ -2.01
SRL1YOR247W EBS1Q03466 884 aaKnown RBP2.52□□□□□ -2.01
SRL1YOR247W STH1P32597 1359 aa2.51□□□□□ -2.01
SRL1YOR247W CFT1Q06632 1357 aaKnown RBP2.51□□□□□ -2.01
SRL1YOR247W ADH1P00330 348 aaKnown RBP2.51□□□□□ -2.01
SRL1YOR247W TDH2P00358 332 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms