RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C ESA1Q08649 445 aa2.33□□□□□ -2.04
DNL4YOR005C RAX1Q08760 435 aa2.33□□□□□ -2.04
DNL4YOR005C THP3Q12049 470 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C SIA1Q12212 622 aa2.33□□□□□ -2.04
DNL4YOR005C YOP1Q12402 180 aa2.33□□□□□ -2.04
DNL4YOR005C AHC1Q12433 566 aa2.33□□□□□ -2.04
DNL4YOR005C YPR1Q12458 312 aa2.33□□□□□ -2.04
DNL4YOR005C YMR030W-AQ3E760 96 aa2.33□□□□□ -2.04
DNL4YOR005C LSO2Q3E772 92 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C MHF1Q3E835 90 aa2.33□□□□□ -2.04
DNL4YOR005C RIB3Q99258 208 aa2.33□□□□□ -2.04
DNL4YOR005C THP2O13539 261 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C YAR066WP0CX18 203 aa2.33□□□□□ -2.04
DNL4YOR005C YHR214WP0CX19 203 aa2.33□□□□□ -2.04
DNL4YOR005C CBS2P14905 389 aa2.33□□□□□ -2.04
DNL4YOR005C MRPL8P22353 238 aa2.33□□□□□ -2.04
DNL4YOR005C YCR090CP25654 182 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C CPR3P25719 182 aa2.33□□□□□ -2.04
DNL4YOR005C VMA5P31412 392 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C COX13P32799 129 aa2.33□□□□□ -2.04
DNL4YOR005C MRPL6P32904 214 aa2.33□□□□□ -2.04
DNL4YOR005C COS9P36034 407 aa2.33□□□□□ -2.04
DNL4YOR005C RPH1P39956 796 aa2.33□□□□□ -2.04
DNL4YOR005C AVT2P39981 480 aa2.33□□□□□ -2.04
DNL4YOR005C YAT2P40017 923 aa2.33□□□□□ -2.04
DNL4YOR005C COS4P43542 379 aa2.33□□□□□ -2.04
DNL4YOR005C GUF1P46943 645 aa2.33□□□□□ -2.04
DNL4YOR005C YJL118WP47022 219 aa2.33□□□□□ -2.04
DNL4YOR005C APS3P47064 194 aa2.33□□□□□ -2.04
DNL4YOR005C ABM1P47146 123 aa2.33□□□□□ -2.04
DNL4YOR005C GIM3P53900 129 aa2.33□□□□□ -2.04
DNL4YOR005C KTR6P54070 446 aa2.33□□□□□ -2.04
DNL4YOR005C LSM3P57743 89 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C IRC15Q02733 499 aa2.33□□□□□ -2.04
DNL4YOR005C ODC1Q03028 310 aa2.33□□□□□ -2.04
DNL4YOR005C YMR099CQ03161 297 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C IZH1Q03419 316 aa2.33□□□□□ -2.04
DNL4YOR005C RVB1Q03940 463 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C MRPL51Q06090 140 aaPredicted RBP2.33□□□□□ -2.04
DNL4YOR005C DTD1Q07648 150 aaKnown RBP2.33□□□□□ -2.04
DNL4YOR005C BSC6Q08280 497 aa2.33□□□□□ -2.04
DNL4YOR005C YDL009CQ12210 107 aa2.33□□□□□ -2.04
DNL4YOR005C YOR214CQ12282 236 aa2.33□□□□□ -2.04
DNL4YOR005C COX4P04037 155 aa2.32□□□□□ -2.04
DNL4YOR005C HPR1P17629 752 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C TIP1P27654 210 aaPredicted RBP2.32□□□□□ -2.04
DNL4YOR005C SPT14P32363 452 aa2.32□□□□□ -2.04
DNL4YOR005C ASF2P32448 525 aaPredicted RBP2.32□□□□□ -2.04
DNL4YOR005C MNS1P32906 549 aa2.32□□□□□ -2.04
DNL4YOR005C PDR3P33200 976 aa2.32□□□□□ -2.04
DNL4YOR005C PHO88P38264 188 aaPredicted RBP2.32□□□□□ -2.04
DNL4YOR005C ARN2P38724 620 aa2.32□□□□□ -2.04
DNL4YOR005C DHH1P39517 506 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C VPS52P39904 641 aa2.32□□□□□ -2.04
DNL4YOR005C FAR7P43592 221 aa2.32□□□□□ -2.04
DNL4YOR005C GTR2P53290 341 aa2.32□□□□□ -2.04
DNL4YOR005C ATP23P53722 227 aa2.32□□□□□ -2.04
DNL4YOR005C YNL234WP53857 426 aa2.32□□□□□ -2.04
DNL4YOR005C IDP3P53982 420 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C PRP38Q00723 242 aaPredicted RBP2.32□□□□□ -2.04
DNL4YOR005C MRPS17Q03246 237 aaPredicted RBP2.32□□□□□ -2.04
DNL4YOR005C YLR283WQ05867 314 aa2.32□□□□□ -2.04
DNL4YOR005C GRS2Q06817 618 aa2.32□□□□□ -2.04
DNL4YOR005C IRC10Q08118 586 aa2.32□□□□□ -2.04
DNL4YOR005C BTS1Q12051 335 aa2.32□□□□□ -2.04
DNL4YOR005C ARF2P19146 181 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C UBC8P28263 218 aa2.32□□□□□ -2.04
DNL4YOR005C PTC1P35182 281 aa2.32□□□□□ -2.04
DNL4YOR005C MCR1P36060 302 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C YFL012WP43580 148 aa2.32□□□□□ -2.04
DNL4YOR005C COX16P47081 118 aa2.32□□□□□ -2.04
DNL4YOR005C YPT32P51996 222 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C PEX31P53203 462 aa2.32□□□□□ -2.04
DNL4YOR005C MKC7P53379 596 aa2.32□□□□□ -2.04
DNL4YOR005C YNL181WP53878 407 aa2.32□□□□□ -2.04
DNL4YOR005C RNY1Q02933 434 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C BCH1Q05029 724 aa2.32□□□□□ -2.04
DNL4YOR005C VPS74Q06385 345 aa2.32□□□□□ -2.04
DNL4YOR005C TPT1Q12272 230 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C ASP3-2P0CX77 362 aa2.32□□□□□ -2.04
DNL4YOR005C ASP3-3P0CX78 362 aa2.32□□□□□ -2.04
DNL4YOR005C ASP3-4P0CX79 362 aa2.32□□□□□ -2.04
DNL4YOR005C ASP3-1P0CZ17 362 aa2.32□□□□□ -2.04
DNL4YOR005C MET16P18408 261 aaPredicted RBP2.32□□□□□ -2.04
DNL4YOR005C AAT2P23542 418 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C TAF14P35189 244 aa2.32□□□□□ -2.04
DNL4YOR005C RSM22P36056 628 aa2.32□□□□□ -2.04
DNL4YOR005C ANR2P36090 516 aaPredicted RBP2.32□□□□□ -2.04
DNL4YOR005C TVP38P36164 337 aa2.32□□□□□ -2.04
DNL4YOR005C YHI9P38765 294 aa2.32□□□□□ -2.04
DNL4YOR005C YER034WP40022 185 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C COA1P40452 197 aa2.32□□□□□ -2.04
DNL4YOR005C PHB1P40961 287 aa2.32□□□□□ -2.04
DNL4YOR005C MNN5P46982 586 aa2.32□□□□□ -2.04
DNL4YOR005C LSM1P47017 172 aaKnown RBP2.32□□□□□ -2.04
DNL4YOR005C GWT1P47026 490 aa2.32□□□□□ -2.04
DNL4YOR005C SSN8P47821 323 aa2.32□□□□□ -2.04
DNL4YOR005C AIF1P52923 378 aa2.32□□□□□ -2.04
DNL4YOR005C LST7P53237 242 aa2.32□□□□□ -2.04
DNL4YOR005C NHP10Q03435 203 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms