RNA–Protein interactions for RNA: YNL251C

NRD1, Transcript of RNA-binding subunit of Nrd1 complex, yeast

Gene NRD1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NRD1	YNL251C	SRO77	P38163	1010 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	AIM3	P38266	947 aa	Known RBP	4.86	□□□□□ -1.63
NRD1	YNL251C	YPT31	P38555	223 aa	Known RBP	4.86	□□□□□ -1.63
NRD1	YNL251C	PTC7	P38797	343 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	FET4	P40988	552 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	ADO1	P47143	340 aa	Known RBP	4.86	□□□□□ -1.63
NRD1	YNL251C	YGL114W	P53134	725 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	COQ6	P53318	479 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	MEP3	P53390	489 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	MPA43	P53583	542 aa	Predicted RBP	4.86	□□□□□ -1.63
NRD1	YNL251C	YNL143C	P53908	130 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	YKR011C	Q02209	353 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	ARG7	Q04728	441 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	YMR253C	Q04835	414 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	PEX30	Q06169	523 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	BER1	Q06688	274 aa	Known RBP	4.86	□□□□□ -1.63
NRD1	YNL251C	IRC10	Q08118	586 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	YOR114W	Q12219	294 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	PST1	Q12355	444 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	AGC1	Q12482	902 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	CSR2	Q12734	1121 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	YPR014C	Q6B0W2	109 aa		4.86	□□□□□ -1.63
NRD1	YNL251C	AFT1	P22149	690 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	PRE9	P23638	258 aa	Known RBP	4.85	□□□□□ -1.63
NRD1	YNL251C	SUI1	P32911	108 aa	Known RBP	4.85	□□□□□ -1.63
NRD1	YNL251C	SNC2	P33328	115 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	YKL069W	P36088	180 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	DRE2	P36152	348 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	MRPL4	P36517	319 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	FAA3	P39002	694 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	PHO90	P39535	881 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	UIP3	P39547	235 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	GET2	P40056	285 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	MET28	P40573	187 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	HXT14	P42833	540 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	UBX6	P47049	396 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	PAC10	P48363	199 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	YGR015C	P53208	328 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	VHT1	P53241	593 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	YGR079W	P53249	370 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	PGA1	P53896	198 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	ECM22	Q05958	814 aa	Predicted RBP	4.85	□□□□□ -1.63
NRD1	YNL251C	YOR385W	Q08909	290 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	RRP42	Q12277	265 aa	Predicted RBP	4.85	□□□□□ -1.63
NRD1	YNL251C	LPX1	Q12405	387 aa	Known RBP	4.85	□□□□□ -1.63
NRD1	YNL251C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.85	□□□□□ -1.63
NRD1	YNL251C	COA6	Q3E846	104 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	SRN2	Q99176	213 aa		4.85	□□□□□ -1.63
NRD1	YNL251C	STT4	P37297	1900 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	YAR066W	P0CX18	203 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	YHR214W	P0CX19	203 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	PBN1	P25580	416 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	RSC6	P25632	483 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	YMC1	P32331	307 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	SFA1	P32771	386 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	DUT1	P33317	147 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	NTF2	P33331	125 aa	Known RBP	4.84	□□□□□ -1.63
NRD1	YNL251C	SEF1	P34228	1148 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	TSA1	P34760	196 aa	Known RBP	4.84	□□□□□ -1.63
NRD1	YNL251C	ELF1	P36053	145 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	MAL32	P38158	584 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	POP7	P38291	140 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	EHT1	P38295	451 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	SHG1	P38337	142 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	HSE1	P38753	452 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	PRP39	P39682	629 aa	Known RBP	4.84	□□□□□ -1.63
NRD1	YNL251C	PUG1	P40100	303 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	FLX1	P40464	311 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	PAU15	P40585	124 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	COX16	P47081	118 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	YJR149W	P47177	404 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	NUP57	P48837	541 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	AVT4	P50944	713 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	YGR012W	P53206	393 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	MAL12	P53341	584 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	BIO5	P53744	561 aa	Known RBP	4.84	□□□□□ -1.63
NRD1	YNL251C	BOP2	Q06150	570 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	MMT2	Q08970	484 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	AKR2	Q12013	749 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	YPR011C	Q12251	326 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	YDL007C-A	Q2V2Q0	85 aa		4.84	□□□□□ -1.63
NRD1	YNL251C	SCH9	P11792	824 aa	Known RBP	4.83	□□□□□ -1.64
NRD1	YNL251C	PPH21	P23594	369 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	GPI12	P23797	304 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	IDH2	P28241	369 aa	Known RBP	4.83	□□□□□ -1.64
NRD1	YNL251C	MKK1	P32490	508 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
NRD1	YNL251C	PRP18	P33411	251 aa	Predicted RBP	4.83	□□□□□ -1.64
NRD1	YNL251C	PHO11	P35842	467 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	BNA4	P38169	460 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	YPC1	P38298	316 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	PHO12	P38693	467 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	SLZ1	P40167	298 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	SDP1	P40479	209 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	SLS1	P42900	643 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	PNC1	P53184	216 aa	Known RBP	4.83	□□□□□ -1.64
NRD1	YNL251C	YGR117C	P53270	476 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	TRM112	P53738	135 aa	Predicted RBP	4.83	□□□□□ -1.64
NRD1	YNL251C	APJ1	P53940	528 aa		4.83	□□□□□ -1.64
NRD1	YNL251C	APM1	Q00776	475 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms