RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W RFA3P26755 122 aaKnown RBP3.51□□□□□ -1.85
PUB1YNL016W YCR041WP37265 110 aa3.51□□□□□ -1.85
PUB1YNL016W CBR1P38626 284 aaKnown RBP3.51□□□□□ -1.85
PUB1YNL016W YER184CP39961 794 aa3.51□□□□□ -1.85
PUB1YNL016W HAT2P39984 401 aa3.51□□□□□ -1.85
PUB1YNL016W COX15P40086 486 aa3.51□□□□□ -1.85
PUB1YNL016W RSM25P40496 264 aa3.51□□□□□ -1.85
PUB1YNL016W SER33P40510 469 aa3.51□□□□□ -1.85
PUB1YNL016W KEG1P43614 200 aa3.51□□□□□ -1.85
PUB1YNL016W CPR7P47103 393 aa3.51□□□□□ -1.85
PUB1YNL016W YGL159WP53110 370 aa3.51□□□□□ -1.85
PUB1YNL016W SLX9P53251 210 aaPredicted RBP3.51□□□□□ -1.85
PUB1YNL016W SWS2P53937 143 aa3.51□□□□□ -1.85
PUB1YNL016W EBS1Q03466 884 aaKnown RBP3.51□□□□□ -1.85
PUB1YNL016W SPG3Q04398 127 aaPredicted RBP3.51□□□□□ -1.85
PUB1YNL016W DIC1Q06143 298 aa3.51□□□□□ -1.85
PUB1YNL016W ASR1Q06834 288 aa3.51□□□□□ -1.85
PUB1YNL016W YDL218WQ07629 317 aa3.51□□□□□ -1.85
PUB1YNL016W YPL150WQ12152 901 aa3.51□□□□□ -1.85
PUB1YNL016W RPB8P20436 146 aa3.51□□□□□ -1.85
PUB1YNL016W MKK1P32490 508 aa3.51□□□□□ -1.85
PUB1YNL016W PRX1P34227 261 aaKnown RBP3.51□□□□□ -1.85
PUB1YNL016W ECM15P35195 104 aa3.51□□□□□ -1.85
PUB1YNL016W YHR035WP38769 630 aa3.51□□□□□ -1.85
PUB1YNL016W PCL5P38794 229 aa3.51□□□□□ -1.85
PUB1YNL016W RBG1P39729 369 aa3.51□□□□□ -1.85
PUB1YNL016W POG1P40473 351 aa3.51□□□□□ -1.85
PUB1YNL016W AIM23P47015 356 aa3.51□□□□□ -1.85
PUB1YNL016W TAD2P47058 250 aa3.51□□□□□ -1.85
PUB1YNL016W YNR048WP53740 393 aa3.51□□□□□ -1.85
PUB1YNL016W CAF40P53829 373 aa3.51□□□□□ -1.85
PUB1YNL016W CDC14Q00684 551 aa3.51□□□□□ -1.85
PUB1YNL016W PRM15Q03262 622 aa3.51□□□□□ -1.85
PUB1YNL016W TRM82Q03774 444 aa3.51□□□□□ -1.85
PUB1YNL016W BNA5Q05979 453 aa3.51□□□□□ -1.85
PUB1YNL016W GAT3Q07928 141 aa3.51□□□□□ -1.85
PUB1YNL016W RPN8Q08723 338 aaKnown RBP3.51□□□□□ -1.85
PUB1YNL016W YPL278CQ08990 100 aa3.51□□□□□ -1.85
PUB1YNL016W ACF2Q12168 779 aa3.51□□□□□ -1.85
PUB1YNL016W SET6Q12529 373 aa3.51□□□□□ -1.85
PUB1YNL016W NAG1Q8TGN9 163 aa3.51□□□□□ -1.85
PUB1YNL016W AQY1P0CD91 305 aa3.5□□□□□ -1.85
PUB1YNL016W HEM15P16622 393 aa3.5□□□□□ -1.85
PUB1YNL016W IDH1P28834 360 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
PUB1YNL016W HRR25P29295 494 aaKnown RBP3.5□□□□□ -1.85
PUB1YNL016W BMH1P29311 267 aaKnown RBP3.5□□□□□ -1.85
PUB1YNL016W MEI4P29467 408 aa3.5□□□□□ -1.85
PUB1YNL016W YEF1P32622 495 aa3.5□□□□□ -1.85
PUB1YNL016W LOS1P33418 1100 aaPredicted RBP3.5□□□□□ -1.85
PUB1YNL016W YKL187CP34231 750 aa3.5□□□□□ -1.85
PUB1YNL016W YPT52P36018 234 aaKnown RBP3.5□□□□□ -1.85
PUB1YNL016W AIM3P38266 947 aaKnown RBP3.5□□□□□ -1.85
PUB1YNL016W BMT2P38278 337 aa3.5□□□□□ -1.85
PUB1YNL016W TDA11P38854 504 aa3.5□□□□□ -1.85
PUB1YNL016W IKI1P38874 309 aa3.5□□□□□ -1.85
PUB1YNL016W IDP2P41939 412 aa3.5□□□□□ -1.85
PUB1YNL016W ASG7P46993 209 aa3.5□□□□□ -1.85
PUB1YNL016W YJR079WP47126 109 aa3.5□□□□□ -1.85
PUB1YNL016W JHD2P47156 728 aaPredicted RBP3.5□□□□□ -1.85
PUB1YNL016W IBA57P47158 497 aa3.5□□□□□ -1.85
PUB1YNL016W YJR141WP47172 347 aaPredicted RBP3.5□□□□□ -1.85
PUB1YNL016W YPT32P51996 222 aaKnown RBP3.5□□□□□ -1.85
PUB1YNL016W MGA1P53050 456 aa3.5□□□□□ -1.85
PUB1YNL016W YIP3P53633 176 aa3.5□□□□□ -1.85
PUB1YNL016W NUP100Q02629 959 aa3.5□□□□□ -1.85
PUB1YNL016W BET5Q03630 159 aa3.5□□□□□ -1.85
PUB1YNL016W SEC13Q04491 297 aaKnown RBP3.5□□□□□ -1.85
PUB1YNL016W THI7Q05998 598 aa3.5□□□□□ -1.85
PUB1YNL016W PER33Q12144 273 aa3.5□□□□□ -1.85
PUB1YNL016W RDL1Q12305 139 aaKnown RBP3.5□□□□□ -1.85
PUB1YNL016W NCA2Q12374 616 aa3.5□□□□□ -1.85
PUB1YNL016W DET1Q99288 334 aaKnown RBP3.5□□□□□ -1.85
PUB1YNL016W BI2P03873 423 aa3.49□□□□□ -1.85
PUB1YNL016W RPL31AP0C2H8 113 aaKnown RBP3.49□□□□□ -1.85
PUB1YNL016W SSC1P0CS90 654 aaKnown RBP3.49□□□□□ -1.85
PUB1YNL016W YCR102CP25608 368 aa3.49□□□□□ -1.85
PUB1YNL016W ITR2P30606 609 aa3.49□□□□□ -1.85
PUB1YNL016W ZRT1P32804 376 aa3.49□□□□□ -1.85
PUB1YNL016W TRM5P38793 499 aa3.49□□□□□ -1.85
PUB1YNL016W RPL10P41805 221 aaKnown RBP3.49□□□□□ -1.85
PUB1YNL016W SNZ3P43545 298 aa3.49□□□□□ -1.85
PUB1YNL016W YFR057WP43625 151 aa3.49□□□□□ -1.85
PUB1YNL016W CIS3P47001 227 aa3.49□□□□□ -1.85
PUB1YNL016W PRP24P49960 444 aaKnown RBP3.49□□□□□ -1.85
PUB1YNL016W MIC26P50087 233 aa3.49□□□□□ -1.85
PUB1YNL016W MIG2P53035 382 aa3.49□□□□□ -1.85
PUB1YNL016W NIF3P53081 288 aa3.49□□□□□ -1.85
PUB1YNL016W CPD1P53314 239 aa3.49□□□□□ -1.85
PUB1YNL016W FRE4P53746 719 aa3.49□□□□□ -1.85
PUB1YNL016W SNZ2P53824 298 aa3.49□□□□□ -1.85
PUB1YNL016W SPR6Q01684 191 aa3.49□□□□□ -1.85
PUB1YNL016W LGE1Q02796 332 aaKnown RBP3.49□□□□□ -1.85
PUB1YNL016W YPL113CQ02961 396 aa3.49□□□□□ -1.85
PUB1YNL016W YML096WQ04489 525 aa3.49□□□□□ -1.85
PUB1YNL016W SPC2Q04969 178 aa3.49□□□□□ -1.85
PUB1YNL016W NNT1Q05874 261 aa3.49□□□□□ -1.85
PUB1YNL016W PLB3Q08108 686 aa3.49□□□□□ -1.85
PUB1YNL016W AIM39Q08223 395 aa3.49□□□□□ -1.85
PUB1YNL016W THI20Q08224 551 aa3.49□□□□□ -1.85
PUB1YNL016W TPT1Q12272 230 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms