RNA–Protein interactions for RNA: YMR030W

RSF1, Transcript of Protein required for respiratory growth, yeast

Gene RSF1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSF1	YMR030W	NCA2	Q12374	616 aa		3.59	□□□□□ -1.83
RSF1	YMR030W	YOR032W-A	Q8TGS1	66 aa		3.59	□□□□□ -1.83
RSF1	YMR030W	STT4	P37297	1900 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	STE3	P06783	470 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	EXG1	P23776	448 aa	Known RBP	3.58	□□□□□ -1.84
RSF1	YMR030W	MGT1	P26188	188 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	ASC1	P38011	319 aa	Known RBP	3.58	□□□□□ -1.84
RSF1	YMR030W	OLA1	P38219	394 aa	Known RBP	3.58	□□□□□ -1.84
RSF1	YMR030W	POP4	P38336	279 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	FRT2	P39734	528 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	UTP25	P40498	721 aa	Known RBP	3.58	□□□□□ -1.84
RSF1	YMR030W	HAC1	P41546	238 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	SEC27	P41811	889 aa	Known RBP	3.58	□□□□□ -1.84
RSF1	YMR030W	AIM24	P47127	394 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	YMR114C	Q04471	368 aa	Known RBP	3.58	□□□□□ -1.84
RSF1	YMR030W	CDC123	Q05791	360 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	RRP40	Q08285	240 aa	Known RBP	3.58	□□□□□ -1.84
RSF1	YMR030W	RRP42	Q12277	265 aa	Predicted RBP	3.58	□□□□□ -1.84
RSF1	YMR030W	EAF3	Q12432	401 aa		3.58	□□□□□ -1.84
RSF1	YMR030W	SPS100	P13130	326 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	CAP2	P13517	287 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	CPR2	P23285	205 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	ERV1	P27882	189 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	CYS4	P32582	507 aa	Known RBP	3.57	□□□□□ -1.84
RSF1	YMR030W	OXA1	P39952	402 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	STE24	P47154	453 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	MKC7	P53379	596 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	PDR16	P53860	351 aa	Known RBP	3.57	□□□□□ -1.84
RSF1	YMR030W	SKI8	Q02793	397 aa	Predicted RBP	3.57	□□□□□ -1.84
RSF1	YMR030W	GOT1	Q03554	138 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	CGI121	Q03705	181 aa	Known RBP	3.57	□□□□□ -1.84
RSF1	YMR030W	FAR10	Q06001	478 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	AEP3	Q12089	606 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	YDL012C	Q12489	107 aa		3.57	□□□□□ -1.84
RSF1	YMR030W	PAR32	Q12515	295 aa	Known RBP	3.57	□□□□□ -1.84
RSF1	YMR030W	PIS1	P06197	220 aa	Known RBP	3.56	□□□□□ -1.84
RSF1	YMR030W	DPH5	P32469	300 aa	Predicted RBP	3.56	□□□□□ -1.84
RSF1	YMR030W	MAL32	P38158	584 aa		3.56	□□□□□ -1.84
RSF1	YMR030W	YBR062C	P38239	180 aa		3.56	□□□□□ -1.84
RSF1	YMR030W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
RSF1	YMR030W	LCB3	P47013	409 aa		3.56	□□□□□ -1.84
RSF1	YMR030W	EMC2	P47133	292 aa	Known RBP	3.56	□□□□□ -1.84
RSF1	YMR030W	BNS1	P50084	137 aa		3.56	□□□□□ -1.84
RSF1	YMR030W	LSM3	P57743	89 aa	Known RBP	3.56	□□□□□ -1.84
RSF1	YMR030W	NHP10	Q03435	203 aa		3.56	□□□□□ -1.84
RSF1	YMR030W	APC4	Q04601	652 aa		3.56	□□□□□ -1.84
RSF1	YMR030W	LIP2	Q06005	328 aa		3.56	□□□□□ -1.84
RSF1	YMR030W	YPR174C	Q06616	221 aa	Predicted RBP	3.56	□□□□□ -1.84
RSF1	YMR030W	PRP46	Q12417	451 aa	Predicted RBP	3.56	□□□□□ -1.84
RSF1	YMR030W	SEC16	P48415	2195 aa	Known RBP	3.55	□□□□□ -1.84
RSF1	YMR030W	DST1	P07273	309 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	YSF3	P0C074	85 aa	Predicted RBP	3.55	□□□□□ -1.84
RSF1	YMR030W	SSC1	P0CS90	654 aa	Known RBP	3.55	□□□□□ -1.84
RSF1	YMR030W	GCD2	P12754	651 aa	Predicted RBP	3.55	□□□□□ -1.84
RSF1	YMR030W	ARO3	P14843	370 aa	Known RBP	3.55	□□□□□ -1.84
RSF1	YMR030W	RPB4	P20433	221 aa	Predicted RBP	3.55	□□□□□ -1.84
RSF1	YMR030W	TRX3	P25372	127 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	STP22	P25604	385 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	ERG9	P29704	444 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	PTM1	P32857	523 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	YHK8	P38776	514 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	YER034W	P40022	185 aa	Known RBP	3.55	□□□□□ -1.84
RSF1	YMR030W	YER079W	P40052	210 aa	Known RBP	3.55	□□□□□ -1.84
RSF1	YMR030W	EFM4	P40516	257 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	YGR067C	P53243	804 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	CRH1	P53301	507 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	YPR064W	Q12492	139 aa		3.55	□□□□□ -1.84
RSF1	YMR030W	RAD1	P06777	1100 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	CMD1	P06787	147 aa	Known RBP	3.54	□□□□□ -1.84
RSF1	YMR030W	YFR010W-A	P0C5N0	62 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	CKI1	P20485	582 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	YEF1	P32622	495 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	ZTA1	P38230	334 aa	Known RBP	3.54	□□□□□ -1.84
RSF1	YMR030W	YRB1	P41920	201 aa	Known RBP	3.54	□□□□□ -1.84
RSF1	YMR030W	ATG18	P43601	500 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	YJR141W	P47172	347 aa	Predicted RBP	3.54	□□□□□ -1.84
RSF1	YMR030W	MAL12	P53341	584 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	APJ1	P53940	528 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	TDA1	Q03533	586 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	GAS3	Q03655	524 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	GAS2	Q06135	555 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	YPL245W	Q12179	454 aa	Known RBP	3.54	□□□□□ -1.84
RSF1	YMR030W	Q0144	Q9ZZW2	109 aa		3.54	□□□□□ -1.84
RSF1	YMR030W	GPA2	P10823	449 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	DAP2	P18962	818 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	CDC50	P25656	391 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	ANR2	P36090	516 aa	Predicted RBP	3.53	□□□□□ -1.84
RSF1	YMR030W	FAD1	P38913	306 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	EGT2	P42835	1041 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	GCD14	P46959	383 aa	Predicted RBP	3.53	□□□□□ -1.84
RSF1	YMR030W	MNN5	P46982	586 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	RAD17	P48581	401 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	CWC22	P53333	577 aa	Known RBP	3.53	□□□□□ -1.84
RSF1	YMR030W	COS1	P53822	381 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	UTP6	Q02354	440 aa	Known RBP	3.53	□□□□□ -1.84
RSF1	YMR030W	MIX14	Q04341	121 aa		3.53	□□□□□ -1.84
RSF1	YMR030W	RUD3	Q12234	484 aa	Known RBP	3.53	□□□□□ -1.84
RSF1	YMR030W	GPI12	P23797	304 aa		3.52	□□□□□ -1.85
RSF1	YMR030W	SEC14	P24280	304 aa	Known RBP	3.52	□□□□□ -1.85
RSF1	YMR030W	RIM1	P32445	135 aa	Known RBP	3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms