RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	DAL2	P25335	343 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	RPB9	P27999	122 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	NPL6	P32832	435 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YBL081W	P38180	368 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	RPH1	P39956	796 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YRB2	P40517	327 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	ORC5	P50874	479 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YGL039W	P53183	348 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	YMR010W	Q03687	405 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	FAR8	Q05040	523 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YPL199C	Q08954	240 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	AIM45	Q12480	344 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	IGO2	Q9P305	131 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	RPL24A	P04449	155 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	SCO1	P23833	295 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	VMA5	P31412	392 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	RIB5	P38145	238 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	UTP9	P38882	575 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	CCT2	P39076	527 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	YIL001W	P40560	513 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	PUS4	P48567	403 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	SCS3	P53012	380 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	MRPL50	P53724	139 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	RNT1	Q02555	471 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	SNO1	Q03144	224 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	CSM3	Q04659	317 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	MSC3	Q05812	728 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	SLF1	Q12034	447 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	YGR035W-A	Q45U48	73 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	ZRC1	P20107	442 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	CDC10	P25342	322 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	MNS1	P32906	549 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	TRS20	P38334	175 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	DIA4	P38705	446 aa	Predicted RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	ULP2	P40537	1034 aa	Predicted RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	TFG2	P41896	400 aa	Predicted RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	AIM25	P47140	327 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	NBP35	P52920	328 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	COP1	P53622	1201 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	ASI1	P54074	624 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	RFM1	Q12192	310 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	BUB3	P26449	341 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	MEI5	P32489	222 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	YOX1	P34161	385 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	RFT1	P38206	574 aa	Predicted RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	1.05	□□□□□ -2.24	not detected
CLU1	YMR012W	SPO73	P40031	143 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	GAT2	P40209	560 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	FAR3	P46671	204 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	SNZ2	P53824	298 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	NUP100	Q02629	959 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	NUP53	Q03790	475 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	YDR132C	Q03900	495 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	ERV41	Q04651	352 aa		1.05	□□□□□ -2.24
CLU1	YMR012W	RUD3	Q12234	484 aa	Known RBP	1.05	□□□□□ -2.24
CLU1	YMR012W	BEM2	P39960	2167 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	CLB2	P24869	491 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	RPL16B	P26785	198 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	REC114	P32841	428 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	YNK1	P36010	153 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	NAT2	P37293	288 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	RTC3	P38804	111 aa	Predicted RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	SIM1	P40472	476 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	URM1	P40554	99 aa	Predicted RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	YNL181W	P53878	407 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	RPM2	Q02773	1202 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	TSR1	Q07381	788 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	RSA1	Q08932	381 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	RRP42	Q12277	265 aa	Predicted RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	SKS1	Q12505	502 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	LAG2	Q92325	660 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	Q0297	Q9ZZV8	51 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	RHO2	P06781	192 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	MDM10	P18409	493 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	CNA1	P23287	553 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	PMT2	P31382	759 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	CSE2	P33308	149 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	PRS3	P38689	320 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	MSS2	P40990	351 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	CHA4	P43634	648 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	SLX9	P53251	210 aa	Predicted RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	IST1	P53843	298 aa	Predicted RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	HMO1	Q03973	246 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	GFD1	Q04839	188 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	NDD1	Q08887	554 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	FCY22	Q12119	530 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	GEP5	Q12393	293 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	PET20	Q99373	253 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	REP2	P03872	296 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	NSP1	P14907	823 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	CDC43	P18898	376 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	SAR1	P20606	190 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	MRPS5	P33759	307 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	SDS24	P38314	527 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	TRM5	P38793	499 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	YER121W	P40076	114 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	AVT7	P40501	490 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	ERG10	P41338	398 aa	Known RBP	1.04	□□□□□ -2.24
CLU1	YMR012W	AGP3	P43548	558 aa		1.04	□□□□□ -2.24
CLU1	YMR012W	LST7	P53237	242 aa		1.04	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 41 ms