RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeast

Gene NMD4, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NMD4	YLR363C	GGC1	P38988	300 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	RTT105	P40063	208 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	JLP2	P40206	208 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	SAS2	P40963	338 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	IBA57	P47158	497 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	MIG2	P53035	382 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	SHY1	P53266	389 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	YNR048W	P53740	393 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	YNL260C	P53846	198 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	YMR181C	Q03231	154 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	HPT1	Q04178	221 aa	Known RBP	4.21	□□□□□ -1.74
NMD4	YLR363C	TAF11	Q04226	346 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	ROY1	Q04847	553 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	HRI1	Q05905	244 aa	Known RBP	4.21	□□□□□ -1.74
NMD4	YLR363C	PST1	Q12355	444 aa		4.21	□□□□□ -1.74
NMD4	YLR363C	CDC8	P00572	216 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NMD4	YLR363C	MTC6	P38849	526 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	SER3	P40054	469 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	SNL1	P40548	159 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	YNL320W	P42840	284 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	HXT11	P54862	567 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	PRP38	Q00723	242 aa	Predicted RBP	4.2	□□□□□ -1.74
NMD4	YLR363C	SRL4	Q03085	281 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	GOT1	Q03554	138 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	YET2	Q04210	160 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	COX20	Q04935	205 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	MDM30	Q05930	598 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	SGT1	Q08446	395 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	UIP4	Q08926	304 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	RRP36	Q12481	300 aa	Predicted RBP	4.2	□□□□□ -1.74
NMD4	YLR363C	SRN2	Q99176	213 aa		4.2	□□□□□ -1.74
NMD4	YLR363C	YBR056W-A	I2HB52	66 aa		4.19	□□□□□ -1.74
NMD4	YLR363C	ARG4	P04076	463 aa	Predicted RBP	4.19	□□□□□ -1.74
NMD4	YLR363C	CLB3	P24870	427 aa		4.19	□□□□□ -1.74
NMD4	YLR363C	YKR015C	P36111	568 aa		4.19	□□□□□ -1.74
NMD4	YLR363C	YER137C	P40083	148 aa	Known RBP	4.19	□□□□□ -1.74
NMD4	YLR363C	APQ12	P40532	138 aa		4.19	□□□□□ -1.74
NMD4	YLR363C	YJR011C	P47086	261 aa	Predicted RBP	4.19	□□□□□ -1.74
NMD4	YLR363C	SEC10	Q06245	871 aa		4.19	□□□□□ -1.74
NMD4	YLR363C	DTD1	Q07648	150 aa	Known RBP	4.19	□□□□□ -1.74
NMD4	YLR363C	TMC1	Q08422	150 aa	Predicted RBP	4.19	□□□□□ -1.74
NMD4	YLR363C	YPR011C	Q12251	326 aa		4.19	□□□□□ -1.74
NMD4	YLR363C	MDY2	Q12285	212 aa		4.19	□□□□□ -1.74
NMD4	YLR363C	RGS2	Q99188	309 aa		4.19	□□□□□ -1.74
NMD4	YLR363C	ADH2	P00331	348 aa	Known RBP	4.18	□□□□□ -1.74
NMD4	YLR363C	DBF2	P22204	572 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	PMT2	P31382	759 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	ERG3	P32353	365 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	PTM1	P32857	523 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	KKQ8	P36004	724 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	ETR1	P38071	380 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	VMA22	P38784	181 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	LSM12	P38828	187 aa	Known RBP	4.18	□□□□□ -1.74
NMD4	YLR363C	PRP39	P39682	629 aa	Known RBP	4.18	□□□□□ -1.74
NMD4	YLR363C	MTW1	P39731	289 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	FRT2	P39734	528 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	JHD2	P47156	728 aa	Predicted RBP	4.18	□□□□□ -1.74
NMD4	YLR363C	TIS11	P47977	285 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	MRPL50	P53724	139 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	TAF12	Q03761	539 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	MHR1	Q06630	226 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	REX4	Q08237	289 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	AKR2	Q12013	749 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	GET4	Q12125	312 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	YMR030W-A	Q3E760	96 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	YOL159C-A	Q3E769	90 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	TRA1	P38811	3744 aa		4.18	□□□□□ -1.74
NMD4	YLR363C	DPB2	P24482	689 aa	Predicted RBP	4.17	□□□□□ -1.74
NMD4	YLR363C	YCR102C	P25608	368 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	YCR090C	P25654	182 aa	Known RBP	4.17	□□□□□ -1.74
NMD4	YLR363C	PHA2	P32452	334 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	COX13	P32799	129 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	MNS1	P32906	549 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	MRPL17	P36528	281 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	ASC1	P38011	319 aa	Known RBP	4.17	□□□□□ -1.74
NMD4	YLR363C	SPP381	P38282	291 aa	Predicted RBP	4.17	□□□□□ -1.74
NMD4	YLR363C	POP7	P38291	140 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	RFC3	P38629	340 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	RTC3	P38804	111 aa	Predicted RBP	4.17	□□□□□ -1.74
NMD4	YLR363C	RCY1	P39531	840 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	MIC19	P43594	170 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	CWC25	P53854	179 aa	Known RBP	4.17	□□□□□ -1.74
NMD4	YLR363C	GIM3	P53900	129 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	RRN5	Q02983	363 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	ABZ2	Q03266	374 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	BOP2	Q06150	570 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	DXO1	Q06349	442 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	YET3	Q07451	203 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	RAX1	Q08760	435 aa		4.17	□□□□□ -1.74
NMD4	YLR363C	SNX3	Q08826	162 aa	Known RBP	4.17	□□□□□ -1.74
NMD4	YLR363C	RVS161	P25343	265 aa	Known RBP	4.16	□□□□□ -1.74
NMD4	YLR363C	LSB5	P25369	354 aa		4.16	□□□□□ -1.74
NMD4	YLR363C	TAH1	P25638	111 aa	Predicted RBP	4.16	□□□□□ -1.74
NMD4	YLR363C	FAA1	P30624	700 aa	Known RBP	4.16	□□□□□ -1.74
NMD4	YLR363C	SUI1	P32911	108 aa	Known RBP	4.16	□□□□□ -1.74
NMD4	YLR363C	VPS21	P36017	210 aa	Known RBP	4.16	□□□□□ -1.74
NMD4	YLR363C	LAS1	P36146	502 aa	Predicted RBP	4.16	□□□□□ -1.74
NMD4	YLR363C	AGE2	P40529	298 aa		4.16	□□□□□ -1.74
NMD4	YLR363C	TMA22	P47089	198 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms