RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W YLL066W-AP0CY00 160 aa3.88□□□□□ -1.79
RPP0YLR340W YLL067W-AP0CY01 160 aa3.88□□□□□ -1.79
RPP0YLR340W EXO70P19658 623 aa3.88□□□□□ -1.79
RPP0YLR340W RHB1P25378 209 aa3.88□□□□□ -1.79
RPP0YLR340W POL4P25615 582 aa3.88□□□□□ -1.79
RPP0YLR340W HBS1P32769 611 aaKnown RBP3.88□□□□□ -1.79
RPP0YLR340W NIC96P34077 839 aa3.88□□□□□ -1.79
RPP0YLR340W YNK1P36010 153 aaKnown RBP3.88□□□□□ -1.79
RPP0YLR340W YBR096WP38256 230 aa3.88□□□□□ -1.79
RPP0YLR340W CCZ1P38273 704 aa3.88□□□□□ -1.79
RPP0YLR340W ALP1P38971 573 aa3.88□□□□□ -1.79
RPP0YLR340W AGE2P40529 298 aa3.88□□□□□ -1.79
RPP0YLR340W YDL186WP48568 277 aa3.88□□□□□ -1.79
RPP0YLR340W YNR064CP53750 290 aa3.88□□□□□ -1.79
RPP0YLR340W TIM11P81449 96 aaPredicted RBP3.88□□□□□ -1.79
RPP0YLR340W YPL108WQ02872 168 aaPredicted RBP3.88□□□□□ -1.79
RPP0YLR340W YDR391CQ04170 232 aa3.88□□□□□ -1.79
RPP0YLR340W PRP11Q07350 266 aaPredicted RBP3.88□□□□□ -1.79
RPP0YLR340W SKI7Q08491 747 aaPredicted RBP3.88□□□□□ -1.79
RPP0YLR340W DIA2Q08496 732 aaPredicted RBP3.88□□□□□ -1.79
RPP0YLR340W RRS1Q08746 203 aaKnown RBP3.88□□□□□ -1.79
RPP0YLR340W APC2Q12440 853 aa3.88□□□□□ -1.79
RPP0YLR340W NKP1Q12493 238 aa3.88□□□□□ -1.79
RPP0YLR340W TIM9O74700 87 aa3.87□□□□□ -1.79
RPP0YLR340W CYC1P00044 109 aaPredicted RBP3.87□□□□□ -1.79
RPP0YLR340W PRE9P23638 258 aaKnown RBP3.87□□□□□ -1.79
RPP0YLR340W VPH2P32341 215 aa3.87□□□□□ -1.79
RPP0YLR340W ARC19P33204 171 aaKnown RBP3.87□□□□□ -1.79
RPP0YLR340W YBR063CP38083 404 aa3.87□□□□□ -1.79
RPP0YLR340W RCY1P39531 840 aa3.87□□□□□ -1.79
RPP0YLR340W FLX1P40464 311 aa3.87□□□□□ -1.79
RPP0YLR340W PFS2P42841 465 aaKnown RBP3.87□□□□□ -1.79
RPP0YLR340W TAX4P47030 604 aa3.87□□□□□ -1.79
RPP0YLR340W YJL055WP47044 245 aa3.87□□□□□ -1.79
RPP0YLR340W BNA2P47125 453 aa3.87□□□□□ -1.79
RPP0YLR340W HNT2P49775 206 aa3.87□□□□□ -1.79
RPP0YLR340W SNO4Q04902 237 aa3.87□□□□□ -1.79
RPP0YLR340W SPR28Q04921 423 aa3.87□□□□□ -1.79
RPP0YLR340W SNT309Q06091 175 aaPredicted RBP3.87□□□□□ -1.79
RPP0YLR340W SFH1Q06168 426 aa3.87□□□□□ -1.79
RPP0YLR340W DBP9Q06218 594 aaKnown RBP3.87□□□□□ -1.79
RPP0YLR340W SRL1Q08673 210 aa3.87□□□□□ -1.79
RPP0YLR340W HSP33Q08914 237 aaKnown RBP3.87□□□□□ -1.79
RPP0YLR340W HSP32Q08992 237 aa3.87□□□□□ -1.79
RPP0YLR340W ULA1Q12059 462 aa3.87□□□□□ -1.79
RPP0YLR340W YLR108CQ12259 485 aa3.87□□□□□ -1.79
RPP0YLR340W YPT6Q99260 215 aa3.87□□□□□ -1.79
RPP0YLR340W PDE2P06776 526 aa3.86□□□□□ -1.79
RPP0YLR340W RPS8AP0CX39 200 aaKnown RBP3.86□□□□□ -1.79
RPP0YLR340W RPS8BP0CX40 200 aaKnown RBP3.86□□□□□ -1.79
RPP0YLR340W YAK1P14680 807 aa3.86□□□□□ -1.79
RPP0YLR340W PRP4P20053 465 aaKnown RBP3.86□□□□□ -1.79
RPP0YLR340W PRP28P23394 588 aa3.86□□□□□ -1.79
RPP0YLR340W CSM1P25651 190 aa3.86□□□□□ -1.79
RPP0YLR340W RPN2P32565 945 aaKnown RBP3.86□□□□□ -1.79
RPP0YLR340W MRE11P32829 692 aa3.86□□□□□ -1.79
RPP0YLR340W NUF2P33895 451 aa3.86□□□□□ -1.79
RPP0YLR340W SRO77P38163 1010 aa3.86□□□□□ -1.79
RPP0YLR340W GPI18P38211 433 aa3.86□□□□□ -1.79
RPP0YLR340W FAT1P38225 669 aa3.86□□□□□ -1.79
RPP0YLR340W YHR035WP38769 630 aa3.86□□□□□ -1.79
RPP0YLR340W RBG1P39729 369 aa3.86□□□□□ -1.79
RPP0YLR340W RSP5P39940 809 aaKnown RBP3.86□□□□□ -1.79
RPP0YLR340W IAH1P41734 238 aa3.86□□□□□ -1.79
RPP0YLR340W TDA10P42938 290 aa3.86□□□□□ -1.79
RPP0YLR340W GEP7P53171 287 aa3.86□□□□□ -1.79
RPP0YLR340W APM1Q00776 475 aaPredicted RBP3.86□□□□□ -1.79
RPP0YLR340W DML1Q03652 475 aa3.86□□□□□ -1.79
RPP0YLR340W HSP31Q04432 237 aa3.86□□□□□ -1.79
RPP0YLR340W YPR196WQ06595 470 aa3.86□□□□□ -1.79
RPP0YLR340W USB1Q12208 290 aaKnown RBP3.86□□□□□ -1.79
RPP0YLR340W YDL199CQ12407 687 aa3.86□□□□□ -1.79
RPP0YLR340W MRX4Q12467 430 aa3.86□□□□□ -1.79
RPP0YLR340W MET3P08536 511 aa3.85□□□□□ -1.79
RPP0YLR340W YOL162WP0CF19 215 aa3.85□□□□□ -1.79
RPP0YLR340W PET9P18239 318 aaKnown RBP3.85□□□□□ -1.79
RPP0YLR340W ELO2P25358 347 aa3.85□□□□□ -1.79
RPP0YLR340W GSH1P32477 678 aa3.85□□□□□ -1.79
RPP0YLR340W PSD1P39006 500 aa3.85□□□□□ -1.79
RPP0YLR340W MPM1P40364 252 aa3.85□□□□□ -1.79
RPP0YLR340W BAT2P47176 376 aaKnown RBP3.85□□□□□ -1.79
RPP0YLR340W MSS11Q03825 758 aa3.85□□□□□ -1.79
RPP0YLR340W BNA7Q04066 261 aa3.85□□□□□ -1.79
RPP0YLR340W SHE9Q04172 456 aa3.85□□□□□ -1.79
RPP0YLR340W DYN3Q04949 312 aa3.85□□□□□ -1.79
RPP0YLR340W RRP9Q06506 573 aaKnown RBP3.85□□□□□ -1.79
RPP0YLR340W THP1Q08231 455 aa3.85□□□□□ -1.79
RPP0YLR340W SIA1Q12212 622 aa3.85□□□□□ -1.79
RPP0YLR340W RAD7P06779 565 aa3.84□□□□□ -1.79
RPP0YLR340W PCL1P24867 279 aa3.84□□□□□ -1.79
RPP0YLR340W BOS1P25385 244 aa3.84□□□□□ -1.79
RPP0YLR340W RER1P25560 188 aa3.84□□□□□ -1.79
RPP0YLR340W IDH1P28834 360 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
RPP0YLR340W IES6P32617 166 aa3.84□□□□□ -1.79
RPP0YLR340W GDH2P33327 1092 aaKnown RBP3.84□□□□□ -1.79
RPP0YLR340W TIF3P34167 436 aaKnown RBP3.84□□□□□ -1.79
RPP0YLR340W FIG1P38224 298 aa3.84□□□□□ -1.79
RPP0YLR340W MLH1P38920 769 aa3.84□□□□□ -1.79
RPP0YLR340W SWD1P39706 426 aa3.84□□□□□ -1.79
RPP0YLR340W YER184CP39961 794 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms