RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C IKI1P38874 309 aa4.04□□□□□ -1.76
CDC42YLR229C AIM10P39965 576 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C PKP1P40530 394 aa4.04□□□□□ -1.76
CDC42YLR229C GTT1P40582 234 aa4.04□□□□□ -1.76
CDC42YLR229C PRM10P42946 383 aa4.04□□□□□ -1.76
CDC42YLR229C ALK1P43633 760 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C DPB11P47027 764 aaPredicted RBP4.04□□□□□ -1.76
CDC42YLR229C COQ5P49017 307 aa4.04□□□□□ -1.76
CDC42YLR229C ROG1P53118 685 aa4.04□□□□□ -1.76
CDC42YLR229C ERG26P53199 349 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C ASI3P53983 676 aa4.04□□□□□ -1.76
CDC42YLR229C TPS1Q00764 495 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C YPL113CQ02961 396 aa4.04□□□□□ -1.76
CDC42YLR229C RVB1Q03940 463 aaKnown RBP4.04□□□□□ -1.76
CDC42YLR229C RRN11Q04712 507 aa4.04□□□□□ -1.76
CDC42YLR229C ROY1Q04847 553 aa4.04□□□□□ -1.76
CDC42YLR229C DCR2Q05924 578 aa4.04□□□□□ -1.76
CDC42YLR229C GAS2Q06135 555 aa4.04□□□□□ -1.76
CDC42YLR229C REX4Q08237 289 aa4.04□□□□□ -1.76
CDC42YLR229C BTS1Q12051 335 aa4.04□□□□□ -1.76
CDC42YLR229C YOR114WQ12219 294 aa4.04□□□□□ -1.76
CDC42YLR229C NAG1Q8TGN9 163 aa4.04□□□□□ -1.76
CDC42YLR229C MSB2P32334 1306 aa4.03□□□□□ -1.76
CDC42YLR229C ARG80P07249 177 aa4.03□□□□□ -1.76
CDC42YLR229C MET2P08465 486 aa4.03□□□□□ -1.76
CDC42YLR229C CDC43P18898 376 aa4.03□□□□□ -1.76
CDC42YLR229C YCR102CP25608 368 aa4.03□□□□□ -1.76
CDC42YLR229C ADE1P27616 306 aa4.03□□□□□ -1.76
CDC42YLR229C GSH1P32477 678 aa4.03□□□□□ -1.76
CDC42YLR229C SKN1P33336 771 aa4.03□□□□□ -1.76
CDC42YLR229C GEP4P38812 185 aa4.03□□□□□ -1.76
CDC42YLR229C AIM2P39721 246 aa4.03□□□□□ -1.76
CDC42YLR229C FAU1P40099 211 aa4.03□□□□□ -1.76
CDC42YLR229C PGD1P40356 397 aa4.03□□□□□ -1.76
CDC42YLR229C BMT5P40493 336 aa4.03□□□□□ -1.76
CDC42YLR229C LYS12P40495 371 aaKnown RBP4.03□□□□□ -1.76
CDC42YLR229C UTP25P40498 721 aaKnown RBP4.03□□□□□ -1.76
CDC42YLR229C GLR1P41921 483 aaKnown RBP4.03□□□□□ -1.76
CDC42YLR229C BNA6P43619 295 aa4.03□□□□□ -1.76
CDC42YLR229C IDS2P46958 469 aa4.03□□□□□ -1.76
CDC42YLR229C SRB7P47822 140 aa4.03□□□□□ -1.76
CDC42YLR229C ASK10P48361 1146 aa4.03□□□□□ -1.76
CDC42YLR229C PUS4P48567 403 aaKnown RBP4.03□□□□□ -1.76
CDC42YLR229C RAD17P48581 401 aa4.03□□□□□ -1.76
CDC42YLR229C SAY1P53324 424 aa4.03□□□□□ -1.76
CDC42YLR229C YDR541CQ03049 344 aa4.03□□□□□ -1.76
CDC42YLR229C MSC1Q03104 513 aa4.03□□□□□ -1.76
CDC42YLR229C YMR279CQ03263 540 aa4.03□□□□□ -1.76
CDC42YLR229C SNX41Q04053 625 aa4.03□□□□□ -1.76
CDC42YLR229C NNT1Q05874 261 aa4.03□□□□□ -1.76
CDC42YLR229C UTP21Q06078 939 aaPredicted RBP4.03□□□□□ -1.76
CDC42YLR229C RRP40Q08285 240 aaKnown RBP4.03□□□□□ -1.76
CDC42YLR229C SKI7Q08491 747 aaPredicted RBP4.03□□□□□ -1.76
CDC42YLR229C PFA4Q12006 378 aa4.03□□□□□ -1.76
CDC42YLR229C USV1Q12132 391 aa4.03□□□□□ -1.76
CDC42YLR229C MED4Q12343 284 aa4.03□□□□□ -1.76
CDC42YLR229C RDI1Q12434 202 aa4.03□□□□□ -1.76
CDC42YLR229C YPR064WQ12492 139 aa4.03□□□□□ -1.76
CDC42YLR229C FSH3Q99369 266 aa4.03□□□□□ -1.76
CDC42YLR229C CDC7P06243 507 aa4.02□□□□□ -1.77
CDC42YLR229C RPC40P07703 335 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C SSA3P09435 649 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C HOM3P10869 527 aa4.02□□□□□ -1.77
CDC42YLR229C ZWF1P11412 505 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C PDA1P16387 420 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C SNF6P18888 332 aa4.02□□□□□ -1.77
CDC42YLR229C CKS1P20486 150 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C EXG1P23776 448 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C CWH43P25618 953 aa4.02□□□□□ -1.77
CDC42YLR229C YIM1P28625 365 aa4.02□□□□□ -1.77
CDC42YLR229C VMA5P31412 392 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C ERG1P32476 496 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C MKK1P32490 508 aa4.02□□□□□ -1.77
CDC42YLR229C SIP1P32578 815 aa4.02□□□□□ -1.77
CDC42YLR229C RML2P32611 393 aa4.02□□□□□ -1.77
CDC42YLR229C SFC1P33303 322 aa4.02□□□□□ -1.77
CDC42YLR229C BNA4P38169 460 aa4.02□□□□□ -1.77
CDC42YLR229C SHE1P38200 338 aa4.02□□□□□ -1.77
CDC42YLR229C IMD2P38697 523 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C LAG1P38703 411 aa4.02□□□□□ -1.77
CDC42YLR229C CHL4P38907 458 aa4.02□□□□□ -1.77
CDC42YLR229C HRB1P38922 454 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
CDC42YLR229C YJL068CP40363 299 aa4.02□□□□□ -1.77
CDC42YLR229C POG1P40473 351 aa4.02□□□□□ -1.77
CDC42YLR229C MET28P40573 187 aa4.02□□□□□ -1.77
CDC42YLR229C SSN8P47821 323 aa4.02□□□□□ -1.77
CDC42YLR229C FMP48P53233 369 aa4.02□□□□□ -1.77
CDC42YLR229C PEF1P53238 335 aa4.02□□□□□ -1.77
CDC42YLR229C YGR079WP53249 370 aa4.02□□□□□ -1.77
CDC42YLR229C CSL4P53859 292 aaPredicted RBP4.02□□□□□ -1.77
CDC42YLR229C NRK1P53915 240 aa4.02□□□□□ -1.77
CDC42YLR229C PLM2Q04383 521 aa4.02□□□□□ -1.77
CDC42YLR229C HLR1Q04429 423 aa4.02□□□□□ -1.77
CDC42YLR229C YMR315WQ04869 349 aaKnown RBP4.02□□□□□ -1.77
CDC42YLR229C YLR352WQ06479 807 aa4.02□□□□□ -1.77
CDC42YLR229C YDL086WQ07505 273 aa4.02□□□□□ -1.77
CDC42YLR229C YOR378WQ08902 515 aa4.02□□□□□ -1.77
CDC42YLR229C DAP1Q12091 152 aa4.02□□□□□ -1.77
CDC42YLR229C YLR111WQ12528 110 aa4.02□□□□□ -1.77
CDC42YLR229C YGL194C-AQ2V2P6 80 aa4.02□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms