RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C TY1A-JR2P47099 440 aa2.16□□□□□ -2.06
CSF1YLR087C ARK1P53974 638 aa2.16□□□□□ -2.06
CSF1YLR087C CCE1Q03702 353 aa2.16□□□□□ -2.06
CSF1YLR087C TY1A-DR1Q03856 440 aa2.16□□□□□ -2.06
CSF1YLR087C TY1A-ML1Q04706 440 aaKnown RBP2.16□□□□□ -2.06
CSF1YLR087C LDS2Q08218 356 aa2.16□□□□□ -2.06
CSF1YLR087C TY1A-GR1Q12085 440 aa2.16□□□□□ -2.06
CSF1YLR087C UTP23Q12339 254 aaKnown RBP2.16□□□□□ -2.06
CSF1YLR087C TY1A-DR3Q12441 440 aa2.16□□□□□ -2.06
CSF1YLR087C TY1A-NL2Q12470 440 aa2.16□□□□□ -2.06
CSF1YLR087C TY1A-GR2Q12485 440 aa2.16□□□□□ -2.06
CSF1YLR087C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.16□□□□□ -2.06
CSF1YLR087C TY1A-OLQ92392 440 aaKnown RBP2.16□□□□□ -2.06
CSF1YLR087C TY1A-ORP0CX59 440 aa2.16□□□□□ -2.06
CSF1YLR087C TY1A-PR2P0CX60 440 aa2.16□□□□□ -2.06
CSF1YLR087C TFS1P14306 219 aa2.16□□□□□ -2.06
CSF1YLR087C DAL7P21826 554 aa2.16□□□□□ -2.06
CSF1YLR087C ISC10P32645 267 aa2.16□□□□□ -2.06
CSF1YLR087C YPT53P36019 220 aa2.16□□□□□ -2.06
CSF1YLR087C YKL162CP36052 402 aa2.16□□□□□ -2.06
CSF1YLR087C YEA6P39953 335 aa2.16□□□□□ -2.06
CSF1YLR087C LCB2P40970 561 aa2.16□□□□□ -2.06
CSF1YLR087C RMR1P53060 241 aa2.16□□□□□ -2.06
CSF1YLR087C EFM6P53970 246 aa2.16□□□□□ -2.06
CSF1YLR087C PKH3Q03306 898 aaPredicted RBP2.16□□□□□ -2.06
CSF1YLR087C RNH202Q05635 350 aa2.16□□□□□ -2.06
CSF1YLR087C SKG3Q06315 1026 aa2.16□□□□□ -2.06
CSF1YLR087C YPR078CQ06813 372 aa2.16□□□□□ -2.06
CSF1YLR087C SRF1Q12516 437 aa2.16□□□□□ -2.06
CSF1YLR087C YBR085C-AO43137 85 aa2.16□□□□□ -2.06
CSF1YLR087C MES1P00958 751 aaKnown RBP2.16□□□□□ -2.06
CSF1YLR087C SST2P11972 698 aaKnown RBP2.16□□□□□ -2.06
CSF1YLR087C SAC1P32368 623 aaKnown RBP2.16□□□□□ -2.06
CSF1YLR087C PEX2P32800 271 aa2.16□□□□□ -2.06
CSF1YLR087C UBS1P38290 277 aa2.16□□□□□ -2.06
CSF1YLR087C DOG2P38773 246 aa2.16□□□□□ -2.06
CSF1YLR087C PRM10P42946 383 aa2.16□□□□□ -2.06
CSF1YLR087C HXT10P43581 546 aa2.16□□□□□ -2.06
CSF1YLR087C COS10P52924 374 aa2.16□□□□□ -2.06
CSF1YLR087C TMS1Q12116 473 aa2.16□□□□□ -2.06
CSF1YLR087C YOL159C-AQ3E769 90 aa2.16□□□□□ -2.06
CSF1YLR087C YKL033W-AQ86ZR7 236 aa2.16□□□□□ -2.06
CSF1YLR087C COX5BP00425 151 aa2.15□□□□□ -2.06
CSF1YLR087C BI4P03879 638 aa2.15□□□□□ -2.06
CSF1YLR087C INO4P13902 151 aa2.15□□□□□ -2.06
CSF1YLR087C PRP18P33411 251 aaPredicted RBP2.15□□□□□ -2.06
CSF1YLR087C MRPS5P33759 307 aa2.15□□□□□ -2.06
CSF1YLR087C PBP2P38151 413 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
CSF1YLR087C YHR122WP38829 231 aa2.15□□□□□ -2.06
CSF1YLR087C SEC24P40482 926 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C MRPL35Q06678 367 aa2.15□□□□□ -2.06
CSF1YLR087C TMA16Q08687 178 aa2.15□□□□□ -2.06
CSF1YLR087C ACC1Q00955 2233 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C TDH2P00358 332 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C TDH3P00359 332 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
CSF1YLR087C ENO2P00925 437 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C ERG12P07277 443 aa2.15□□□□□ -2.06
CSF1YLR087C RPS25BP0C0T4 108 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C YCK2P23292 546 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C CLB6P32943 380 aa2.15□□□□□ -2.06
CSF1YLR087C YHL044WP38727 235 aa2.15□□□□□ -2.06
CSF1YLR087C AAD14P42884 376 aa2.15□□□□□ -2.06
CSF1YLR087C SSY5P47002 699 aa2.15□□□□□ -2.06
CSF1YLR087C ASN2P49090 572 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C RPS25AQ3E792 108 aaPredicted RBP2.15□□□□□ -2.06
CSF1YLR087C MET16P18408 261 aaPredicted RBP2.15□□□□□ -2.06
CSF1YLR087C MRP20P32387 263 aa2.15□□□□□ -2.06
CSF1YLR087C SRB6P32570 121 aa2.15□□□□□ -2.06
CSF1YLR087C TCD2P36101 447 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C MRPL39P36533 70 aa2.15□□□□□ -2.06
CSF1YLR087C ROT2P38138 954 aa2.15□□□□□ -2.06
CSF1YLR087C JHD1P40034 492 aa2.15□□□□□ -2.06
CSF1YLR087C MTO1P53070 669 aa2.15□□□□□ -2.06
CSF1YLR087C GEP7P53171 287 aa2.15□□□□□ -2.06
CSF1YLR087C PGA1P53896 198 aa2.15□□□□□ -2.06
CSF1YLR087C SUR7P54003 302 aa2.15□□□□□ -2.06
CSF1YLR087C LOA1Q06508 300 aa2.15□□□□□ -2.06
CSF1YLR087C WHI4Q07655 649 aaKnown RBP2.15□□□□□ -2.06
CSF1YLR087C COQ4O13525 335 aa2.15□□□□□ -2.07
CSF1YLR087C COX5AP00424 153 aa2.15□□□□□ -2.07
CSF1YLR087C GAL10P04397 699 aa2.15□□□□□ -2.07
CSF1YLR087C RPS16AP0CX51 143 aaKnown RBP2.15□□□□□ -2.07
CSF1YLR087C RPS16BP0CX52 143 aaKnown RBP2.15□□□□□ -2.07
CSF1YLR087C ECT1P33412 323 aa2.15□□□□□ -2.07
CSF1YLR087C CTP1P38152 299 aa2.15□□□□□ -2.07
CSF1YLR087C QDR3P38227 689 aa2.15□□□□□ -2.07
CSF1YLR087C MEP2P41948 499 aa2.15□□□□□ -2.07
CSF1YLR087C TPT1Q12272 230 aaKnown RBP2.15□□□□□ -2.07
CSF1YLR087C APE1P14904 514 aa2.15□□□□□ -2.07
CSF1YLR087C SIS1P25294 352 aaKnown RBP2.15□□□□□ -2.07
CSF1YLR087C MET22P32179 357 aa2.15□□□□□ -2.07
CSF1YLR087C SNU13P39990 126 aaKnown RBP2.15□□□□□ -2.07
CSF1YLR087C FMP52P40008 231 aa2.15□□□□□ -2.07
CSF1YLR087C PEX17P40155 199 aa2.15□□□□□ -2.07
CSF1YLR087C FET4P40988 552 aa2.15□□□□□ -2.07
CSF1YLR087C TRM9P49957 279 aa2.15□□□□□ -2.07
CSF1YLR087C YDR262WQ12331 272 aa2.15□□□□□ -2.07
CSF1YLR087C PEX11Q12462 236 aa2.15□□□□□ -2.07
CSF1YLR087C PET20Q99373 253 aa2.15□□□□□ -2.07
CSF1YLR087C SEN1Q00416 2231 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms