RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A FMP16Q12497 93 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A YNL162W-AQ3E7A8 72 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A COA6Q3E846 104 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A SNQ2P32568 1501 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A YBR085C-AO43137 85 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A DFR1P07807 211 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
YLR035C-AYLR035C-A RPS24AP0CX31 135 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A RPS24BP0CX32 135 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A HAP3P13434 144 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A MET16P18408 261 aaPredicted RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A DAL82P21705 255 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A MGR1P25573 417 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A CDC50P25656 391 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A ERV15P38312 142 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A ERG7P38604 731 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A RCK1P38622 512 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A URA8P38627 578 aaPredicted RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A YHR127WP38833 243 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A VRG4P40107 337 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A PRE6P40303 254 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A HXT14P42833 540 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A SCD6P45978 349 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
YLR035C-AYLR035C-A MRX5P47007 382 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A EFM3P47163 339 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A CTF18P49956 741 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A PHB2P50085 310 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A BOR1P53838 576 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A PRP38Q00723 242 aaPredicted RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A SKO1Q02100 647 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A HPT1Q04178 221 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A HLR1Q04429 423 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A SFH1Q06168 426 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A YLR179CQ06252 201 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A SUE1Q06524 206 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A MRX9Q07349 420 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A PAM18Q07914 168 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A SPC3Q12133 184 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A GET3Q12154 354 aaKnown RBP1.61□□□□□ -2.15
YLR035C-AYLR035C-A UBX3Q12229 455 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A RMD5Q12508 421 aa1.61□□□□□ -2.15
YLR035C-AYLR035C-A SAL1D6W196 494 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A COX5BP00425 151 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A TPI1P00942 248 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A RPL31AP0C2H8 113 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A RPL31BP0C2H9 113 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A RPS16AP0CX51 143 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A RPS16BP0CX52 143 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A MAG1P22134 296 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A RRT12P25381 491 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A YCL068CP25593 260 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A ARP2P32381 391 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A CDC5P32562 705 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A GCG1P32656 232 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A MCH2P36032 473 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A PFF1P38244 976 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A VHC1P38329 1120 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A OXA1P39952 402 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A RFC2P40348 353 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A YIR016WP40572 265 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A CDC40P40968 455 aaPredicted RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A RPS12P48589 143 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A GLO1P50107 326 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A TIM21P53220 239 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A YPR003CP53394 754 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A HHO1P53551 258 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A YNL260CP53846 198 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A MTQ1P53944 314 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A EKI1Q03764 534 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A SNO4Q04902 237 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A MEU1Q07938 337 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
YLR035C-AYLR035C-A ALE1Q08548 619 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A HSP33Q08914 237 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A HSP32Q08992 237 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A ATX2Q12067 313 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A FCY22Q12119 530 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A YLR050CQ12155 161 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A TPO4Q12256 659 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A YDL199CQ12407 687 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A FOL3Q12676 427 aaPredicted RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A URB1P34241 1764 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A ARG80P07249 177 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A GAL3P13045 520 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A MTF1P14908 341 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A ANB1P19211 157 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A SRB6P32570 121 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A RGT1P32862 1170 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A SOF1P33750 489 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A SIP2P34164 415 aaKnown RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A YET1P35723 206 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A CBT1P36038 271 aaPredicted RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A VID24P38263 362 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A RBG1P39729 369 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A VPS52P39904 641 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A TIR3P40552 269 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A IME4P41833 600 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A CAK1P43568 368 aaPredicted RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A GNA1P43577 159 aaPredicted RBP1.6□□□□□ -2.15
YLR035C-AYLR035C-A PMT4P46971 762 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A UBX6P47049 396 aa1.6□□□□□ -2.15
YLR035C-AYLR035C-A XPT1P47165 209 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms