RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C RRG7Q08774 242 aaPredicted RBP2.7□□□□□ -1.98
SDO1YLR022C RUP1Q12242 671 aa2.7□□□□□ -1.98
SDO1YLR022C RTR2Q12378 196 aa2.7□□□□□ -1.98
SDO1YLR022C YGR035W-AQ45U48 73 aa2.7□□□□□ -1.98
SDO1YLR022C DDP1Q99321 188 aaKnown RBP2.7□□□□□ -1.98
SDO1YLR022C QCR6P00127 147 aa2.69□□□□□ -1.98
SDO1YLR022C RAD10P06838 210 aa2.69□□□□□ -1.98
SDO1YLR022C GCD2P12754 651 aaPredicted RBP2.69□□□□□ -1.98
SDO1YLR022C SEC14P24280 304 aaKnown RBP2.69□□□□□ -1.98
SDO1YLR022C PPQ1P32945 549 aa2.69□□□□□ -1.98
SDO1YLR022C SDH3P33421 198 aa2.69□□□□□ -1.98
SDO1YLR022C RPC37P36121 282 aa2.69□□□□□ -1.98
SDO1YLR022C ADH5P38113 351 aaKnown RBP2.69□□□□□ -1.98
SDO1YLR022C AST2P39945 430 aaKnown RBP2.69□□□□□ -1.98
SDO1YLR022C YIL029CP40538 142 aa2.69□□□□□ -1.98
SDO1YLR022C RRN5Q02983 363 aa2.69□□□□□ -1.98
SDO1YLR022C DCS1Q06151 350 aa2.69□□□□□ -1.98
SDO1YLR022C VPS74Q06385 345 aa2.69□□□□□ -1.98
SDO1YLR022C SLD7Q08457 257 aa2.69□□□□□ -1.98
SDO1YLR022C HNT3Q08702 217 aa2.69□□□□□ -1.98
SDO1YLR022C RAD52P06778 471 aaKnown RBP2.68□□□□□ -1.98
SDO1YLR022C PEP4P07267 405 aaKnown RBP2.68□□□□□ -1.98
SDO1YLR022C DBP3P20447 523 aaKnown RBP2.68□□□□□ -1.98
SDO1YLR022C RAD51P25454 400 aa2.68□□□□□ -1.98
SDO1YLR022C ITR1P30605 584 aa2.68□□□□□ -1.98
SDO1YLR022C HSP150P32478 413 aa2.68□□□□□ -1.98
SDO1YLR022C CYS4P32582 507 aaKnown RBP2.68□□□□□ -1.98
SDO1YLR022C REC114P32841 428 aa2.68□□□□□ -1.98
SDO1YLR022C MRPL39P36533 70 aa2.68□□□□□ -1.98
SDO1YLR022C CBP4P37267 147 aa2.68□□□□□ -1.98
SDO1YLR022C THI2P38141 450 aa2.68□□□□□ -1.98
SDO1YLR022C BNA4P38169 460 aa2.68□□□□□ -1.98
SDO1YLR022C OLA1P38219 394 aaKnown RBP2.68□□□□□ -1.98
SDO1YLR022C ZTA1P38230 334 aaKnown RBP2.68□□□□□ -1.98
SDO1YLR022C FES1P38260 290 aa2.68□□□□□ -1.98
SDO1YLR022C MLH1P38920 769 aa2.68□□□□□ -1.98
SDO1YLR022C BFR1P38934 470 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
SDO1YLR022C HAT2P39984 401 aa2.68□□□□□ -1.98
SDO1YLR022C VHS2P40463 436 aa2.68□□□□□ -1.98
SDO1YLR022C YFL064CP43540 174 aa2.68□□□□□ -1.98
SDO1YLR022C EFM3P47163 339 aa2.68□□□□□ -1.98
SDO1YLR022C TIS11P47977 285 aa2.68□□□□□ -1.98
SDO1YLR022C MPA43P53583 542 aaPredicted RBP2.68□□□□□ -1.98
SDO1YLR022C SPP2Q02521 185 aa2.68□□□□□ -1.98
SDO1YLR022C YDR249CQ03787 373 aa2.68□□□□□ -1.98
SDO1YLR022C YDR278CQ05612 105 aa2.68□□□□□ -1.98
SDO1YLR022C PHO92Q06390 306 aa2.68□□□□□ -1.98
SDO1YLR022C YPR172WQ06608 200 aa2.68□□□□□ -1.98
SDO1YLR022C UIP4Q08926 304 aa2.68□□□□□ -1.98
SDO1YLR022C YPR202WQ08993 238 aa2.68□□□□□ -1.98
SDO1YLR022C SRL2Q12020 392 aa2.68□□□□□ -1.98
SDO1YLR022C LSP1Q12230 341 aaKnown RBP2.68□□□□□ -1.98
SDO1YLR022C RUD3Q12234 484 aaKnown RBP2.68□□□□□ -1.98
SDO1YLR022C VAM3Q12241 283 aa2.68□□□□□ -1.98
SDO1YLR022C STE2D6VTK4 431 aa2.67□□□□□ -1.98
SDO1YLR022C CBP2P03874 630 aaPredicted RBP2.67□□□□□ -1.98
SDO1YLR022C ILV5P06168 395 aaKnown RBP2.67□□□□□ -1.98
SDO1YLR022C TFS1P14306 219 aa2.67□□□□□ -1.98
SDO1YLR022C PET18P25362 215 aa2.67□□□□□ -1.98
SDO1YLR022C TRX3P25372 127 aa2.67□□□□□ -1.98
SDO1YLR022C RIM1P32445 135 aaKnown RBP2.67□□□□□ -1.98
SDO1YLR022C MSN2P33748 704 aa2.67□□□□□ -1.98
SDO1YLR022C TRR2P38816 342 aa2.67□□□□□ -1.98
SDO1YLR022C AGE2P40529 298 aa2.67□□□□□ -1.98
SDO1YLR022C CLD1P53264 445 aa2.67□□□□□ -1.98
SDO1YLR022C WSC2P53832 503 aa2.67□□□□□ -1.98
SDO1YLR022C TIM11P81449 96 aaPredicted RBP2.67□□□□□ -1.98
SDO1YLR022C IRC15Q02733 499 aa2.67□□□□□ -1.98
SDO1YLR022C GRX3Q03835 250 aa2.67□□□□□ -1.98
SDO1YLR022C NDL1Q06568 189 aa2.67□□□□□ -1.98
SDO1YLR022C YLR413WQ06689 675 aa2.67□□□□□ -1.98
SDO1YLR022C YPR091CQ06833 770 aa2.67□□□□□ -1.98
SDO1YLR022C CSI2Q08054 341 aa2.67□□□□□ -1.98
SDO1YLR022C PSF1Q12488 208 aa2.67□□□□□ -1.98
SDO1YLR022C YER078W-AQ3E7A2 54 aa2.67□□□□□ -1.98
SDO1YLR022C MSI1P13712 422 aa2.66□□□□□ -1.98
SDO1YLR022C EXO70P19658 623 aa2.66□□□□□ -1.98
SDO1YLR022C MDH2P22133 377 aa2.66□□□□□ -1.98
SDO1YLR022C RPS5P26783 225 aaKnown RBP2.66□□□□□ -1.98
SDO1YLR022C ECM25P32525 599 aa2.66□□□□□ -1.98
SDO1YLR022C GCG1P32656 232 aaKnown RBP2.66□□□□□ -1.98
SDO1YLR022C YUH1P35127 236 aa2.66□□□□□ -1.98
SDO1YLR022C PRY2P36110 329 aa2.66□□□□□ -1.98
SDO1YLR022C ATP3P38077 311 aaKnown RBP2.66□□□□□ -1.98
SDO1YLR022C RCK2P38623 610 aa2.66□□□□□ -1.98
SDO1YLR022C MNN9P39107 395 aaKnown RBP2.66□□□□□ -1.98
SDO1YLR022C MBB1P39534 108 aa2.66□□□□□ -1.98
SDO1YLR022C SSO2P39926 295 aa2.66□□□□□ -1.98
SDO1YLR022C YER034WP40022 185 aaKnown RBP2.66□□□□□ -1.98
SDO1YLR022C YER121WP40076 114 aa2.66□□□□□ -1.98
SDO1YLR022C EGT2P42835 1041 aa2.66□□□□□ -1.98
SDO1YLR022C PRM10P42946 383 aa2.66□□□□□ -1.98
SDO1YLR022C ECM27P47144 725 aa2.66□□□□□ -1.98
SDO1YLR022C ADD37Q03233 198 aa2.66□□□□□ -1.98
SDO1YLR022C PAL1Q05518 499 aaKnown RBP2.66□□□□□ -1.98
SDO1YLR022C MSC3Q05812 728 aa2.66□□□□□ -1.98
SDO1YLR022C YDL180WQ12301 547 aa2.66□□□□□ -1.98
SDO1YLR022C STE7P06784 515 aa2.65□□□□□ -1.99
SDO1YLR022C ARO3P14843 370 aaKnown RBP2.65□□□□□ -1.99
SDO1YLR022C HSP26P15992 214 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms