RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	DAL80	P26343	269 aa		4.09	□□□□□ -1.75
SKG1	YKR100C	EGT2	P42835	1041 aa		4.09	□□□□□ -1.75
SKG1	YKR100C	SFH5	P47008	294 aa		4.09	□□□□□ -1.75
SKG1	YKR100C	YMR111C	Q04461	462 aa	Predicted RBP	4.09	□□□□□ -1.75
SKG1	YKR100C	COS7	Q07788	383 aa		4.09	□□□□□ -1.75
SKG1	YKR100C	SRL2	Q12020	392 aa		4.09	□□□□□ -1.75
SKG1	YKR100C	YHR214C-D	P0CX93	97 aa		4.08	□□□□□ -1.76
SKG1	YKR100C	ERG3	P32353	365 aa		4.08	□□□□□ -1.76
SKG1	YKR100C	STE24	P47154	453 aa		4.08	□□□□□ -1.76
SKG1	YKR100C	TAF11	Q04226	346 aa		4.08	□□□□□ -1.76
SKG1	YKR100C	SCEI	P03882	235 aa		4.07	□□□□□ -1.76
SKG1	YKR100C	YJL197C-A	P0C5P0	93 aa		4.07	□□□□□ -1.76
SKG1	YKR100C	ERD1	P16151	362 aa		4.07	□□□□□ -1.76
SKG1	YKR100C	CLB3	P24870	427 aa		4.07	□□□□□ -1.76
SKG1	YKR100C	NTC20	P38302	140 aa	Predicted RBP	4.07	□□□□□ -1.76
SKG1	YKR100C	SBE22	P38814	852 aa		4.07	□□□□□ -1.76
SKG1	YKR100C	KAP114	P53067	1004 aa		4.07	□□□□□ -1.76
SKG1	YKR100C	BMH1	P29311	267 aa	Known RBP	4.06	□□□□□ -1.76
SKG1	YKR100C	ROG1	P53118	685 aa		4.06	□□□□□ -1.76
SKG1	YKR100C	YME2	P32843	850 aa		4.05	□□□□□ -1.76
SKG1	YKR100C	TIP20	P33891	701 aa		4.05	□□□□□ -1.76
SKG1	YKR100C	CHK1	P38147	527 aa		4.05	□□□□□ -1.76
SKG1	YKR100C	RTC2	P38279	296 aa		4.05	□□□□□ -1.76
SKG1	YKR100C	INM1	P38710	295 aa		4.05	□□□□□ -1.76
SKG1	YKR100C	DFG10	P40526	253 aa		4.05	□□□□□ -1.76
SKG1	YKR100C	MPS2	P53159	387 aa		4.05	□□□□□ -1.76
SKG1	YKR100C	SEI1	Q06058	285 aa		4.05	□□□□□ -1.76
SKG1	YKR100C	AUA1	P32450	94 aa		4.04	□□□□□ -1.76
SKG1	YKR100C	SPT10	P35208	640 aa		4.04	□□□□□ -1.76
SKG1	YKR100C	RRP4	P38792	359 aa	Known RBP	4.04	□□□□□ -1.76
SKG1	YKR100C	PAC11	P40960	533 aa		4.04	□□□□□ -1.76
SKG1	YKR100C	KEL2	P50090	882 aa		4.04	□□□□□ -1.76
SKG1	YKR100C	SKO1	Q02100	647 aa		4.04	□□□□□ -1.76
SKG1	YKR100C	YPL107W	Q02873	248 aa		4.04	□□□□□ -1.76
SKG1	YKR100C	EBS1	Q03466	884 aa	Known RBP	4.04	□□□□□ -1.76
SKG1	YKR100C	MFG1	Q07684	458 aa		4.04	□□□□□ -1.76
SKG1	YKR100C	JID1	Q12350	301 aa		4.04	□□□□□ -1.76
SKG1	YKR100C	CDC21	P06785	304 aa		4.03	□□□□□ -1.76
SKG1	YKR100C	TFS1	P14306	219 aa		4.03	□□□□□ -1.76
SKG1	YKR100C	TRX1	P22217	103 aa	Known RBP	4.03	□□□□□ -1.76
SKG1	YKR100C	MRPL39	P36533	70 aa		4.03	□□□□□ -1.76
SKG1	YKR100C	MAK5	P38112	773 aa	Predicted RBP	4.03	□□□□□ -1.76
SKG1	YKR100C	ECM8	P38246	354 aa		4.03	□□□□□ -1.76
SKG1	YKR100C	YER121W	P40076	114 aa		4.03	□□□□□ -1.76
SKG1	YKR100C	RIF2	Q06208	395 aa		4.03	□□□□□ -1.76
SKG1	YKR100C	TSR2	Q06672	205 aa	Known RBP	4.03	□□□□□ -1.76
SKG1	YKR100C	TPT1	Q12272	230 aa	Known RBP	4.03	□□□□□ -1.76
SKG1	YKR100C	SKS1	Q12505	502 aa		4.03	□□□□□ -1.76
SKG1	YKR100C	GPI12	P23797	304 aa		4.02	□□□□□ -1.77
SKG1	YKR100C	YCL068C	P25593	260 aa		4.02	□□□□□ -1.77
SKG1	YKR100C	GCG1	P32656	232 aa	Known RBP	4.02	□□□□□ -1.77
SKG1	YKR100C	PEX5	P35056	612 aa		4.02	□□□□□ -1.77
SKG1	YKR100C	GGC1	P38988	300 aa		4.02	□□□□□ -1.77
SKG1	YKR100C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
SKG1	YKR100C	YNL247W	P53852	767 aa	Known RBP	4.02	□□□□□ -1.77
SKG1	YKR100C	YLR460C	P54007	376 aa		4.02	□□□□□ -1.77
SKG1	YKR100C	SED1	Q01589	338 aa		4.02	□□□□□ -1.77
SKG1	YKR100C	YLL007C	Q07799	665 aa		4.02	□□□□□ -1.77
SKG1	YKR100C	PHA2	P32452	334 aa		4.01	□□□□□ -1.77
SKG1	YKR100C	ASC1	P38011	319 aa	Known RBP	4.01	□□□□□ -1.77
SKG1	YKR100C	YSW1	P38280	609 aa		4.01	□□□□□ -1.77
SKG1	YKR100C	COX14	P39103	70 aa		4.01	□□□□□ -1.77
SKG1	YKR100C	ALB1	P47019	175 aa	Predicted RBP	4.01	□□□□□ -1.77
SKG1	YKR100C	MRM2	P53123	320 aa		4.01	□□□□□ -1.77
SKG1	YKR100C	LIP2	Q06005	328 aa		4.01	□□□□□ -1.77
SKG1	YKR100C	NDE2	Q07500	545 aa		4.01	□□□□□ -1.77
SKG1	YKR100C	RRP40	Q08285	240 aa	Known RBP	4.01	□□□□□ -1.77
SKG1	YKR100C	YBL111C	Q3E7Y5	667 aa		4.01	□□□□□ -1.77
SKG1	YKR100C	ISN1	Q99312	450 aa		4.01	□□□□□ -1.77
SKG1	YKR100C	SAL1	D6W196	494 aa		4	□□□□□ -1.77
SKG1	YKR100C	STE3	P06783	470 aa		4	□□□□□ -1.77
SKG1	YKR100C	SSC1	P0CS90	654 aa	Known RBP	4	□□□□□ -1.77
SKG1	YKR100C	MEI4	P29467	408 aa		4	□□□□□ -1.77
SKG1	YKR100C	RRP1	P35178	278 aa	Predicted RBP	4	□□□□□ -1.77
SKG1	YKR100C	RBG1	P39729	369 aa		4	□□□□□ -1.77
SKG1	YKR100C	OXA1	P39952	402 aa		4	□□□□□ -1.77
SKG1	YKR100C	YFR057W	P43625	151 aa		4	□□□□□ -1.77
SKG1	YKR100C	ATP22	P50273	684 aa	Predicted RBP	4	□□□□□ -1.77
SKG1	YKR100C	DCR2	Q05924	578 aa		4	□□□□□ -1.77
SKG1	YKR100C	SNT309	Q06091	175 aa	Predicted RBP	4	□□□□□ -1.77
SKG1	YKR100C	FRE8	Q12209	686 aa		4	□□□□□ -1.77
SKG1	YKR100C	ATG34	Q12292	412 aa		4	□□□□□ -1.77
SKG1	YKR100C	YPR064W	Q12492	139 aa		4	□□□□□ -1.77
SKG1	YKR100C	APQ12	P40532	138 aa		3.99	□□□□□ -1.77
SKG1	YKR100C	YJR149W	P47177	404 aa		3.99	□□□□□ -1.77
SKG1	YKR100C	YGR015C	P53208	328 aa		3.99	□□□□□ -1.77
SKG1	YKR100C	MPA43	P53583	542 aa	Predicted RBP	3.99	□□□□□ -1.77
SKG1	YKR100C	LSM3	P57743	89 aa	Known RBP	3.99	□□□□□ -1.77
SKG1	YKR100C	URH1	Q04179	340 aa		3.99	□□□□□ -1.77
SKG1	YKR100C	YGK3	Q12222	375 aa	Predicted RBP	3.99	□□□□□ -1.77
SKG1	YKR100C	IMA3	P0CW40	589 aa		3.98	□□□□□ -1.77
SKG1	YKR100C	IMA4	P0CW41	589 aa		3.98	□□□□□ -1.77
SKG1	YKR100C	RPB5	P20434	215 aa		3.98	□□□□□ -1.77
SKG1	YKR100C	SSE1	P32589	693 aa	Known RBP	3.98	□□□□□ -1.77
SKG1	YKR100C	BNS1	P50084	137 aa		3.98	□□□□□ -1.77
SKG1	YKR100C	IMA2	Q08295	589 aa		3.98	□□□□□ -1.77
SKG1	YKR100C	PST1	Q12355	444 aa		3.98	□□□□□ -1.77
SKG1	YKR100C	DBF4	P32325	704 aa		3.97	□□□□□ -1.77
SKG1	YKR100C	IES6	P32617	166 aa		3.97	□□□□□ -1.77
SKG1	YKR100C	CLG1	P35190	452 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms