RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	SOL1	P50278	321 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	DAD3	P69850	94 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	GAS2	Q06135	555 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	PRP11	Q07350	266 aa	Predicted RBP	3.77	□□□□□ -1.81
NUP133	YKR082W	THI72	Q08579	599 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	SAM2	P19358	384 aa	Known RBP	3.77	□□□□□ -1.81
NUP133	YKR082W	ILV6	P25605	309 aa	Known RBP	3.77	□□□□□ -1.81
NUP133	YKR082W	GAC1	P28006	793 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	AEP1	P32493	518 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	DRE2	P36152	348 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	YKR075C	P36155	307 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	MRPL24	P36525	258 aa	Predicted RBP	3.77	□□□□□ -1.81
NUP133	YKR082W	YBR137W	P38276	179 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	SLS1	P42900	643 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	TIS11	P47977	285 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	GCV1	P48015	400 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	ARI1	P53111	347 aa	Known RBP	3.77	□□□□□ -1.81
NUP133	YKR082W	YGL082W	P53155	381 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	SLG1	P54867	378 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	NRG1	Q03125	231 aa		3.77	□□□□□ -1.81
NUP133	YKR082W	YBR085C-A	O43137	85 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	PHO13	P19881	312 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	AHC2	P25649	128 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	SAC1	P32368	623 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	RTG1	P32607	177 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
NUP133	YKR082W	SIP2	P34164	415 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	RPF1	P38805	295 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	BAT1	P38891	393 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	PRE6	P40303	254 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	MAF1	P41910	395 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	YJR079W	P47126	109 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	CTH1	P47976	325 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	EXG2	P52911	562 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	MPA43	P53583	542 aa	Predicted RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	ELP4	Q02884	456 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	YPL113C	Q02961	396 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	AIM34	Q03673	198 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	PRS5	Q12265	496 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	YBL029C-A	Q3E756	94 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	RIM15	P43565	1770 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	GPM1	P00950	247 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	CLB2	P24869	491 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	IES6	P32617	166 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	YSC83	P32792	385 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	REC114	P32841	428 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	LST4	P34239	828 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	ROT2	P38138	954 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	GIC1	P38785	314 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	YHR127W	P38833	243 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	FAU1	P40099	211 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	IKS1	P47042	667 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	YKR011C	Q02209	353 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	SMP3	Q04174	516 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	FAS2	P19097	1887 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	CUP2	P15315	225 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	URK1	P27515	501 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	YBR144C	P34215	104 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	YPT53	P36019	220 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	YPS6	P40583	537 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	RPE1	P46969	238 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	ROG1	P53118	685 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	ASI2	P53895	289 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	YPL108W	Q02872	168 aa	Predicted RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	YMR320W	Q04897	101 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	BNA5	Q05979	453 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	MED7	Q08278	222 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	FSF1	Q12029	327 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	YOR283W	Q12040	230 aa	Known RBP	3.76	□□□□□ -1.81
NUP133	YKR082W	ISU2	Q12056	156 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	POM34	Q12445	299 aa		3.76	□□□□□ -1.81
NUP133	YKR082W	PUP3	P25451	205 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	PRO1	P32264	428 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	OAR1	P35731	278 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	DCW1	P36091	449 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	TRM7	P38238	310 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	YCH1	P42937	148 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	RPS10B	P46784	105 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	UBX6	P47049	396 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	RPS12	P48589	143 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	MSO1	P53604	210 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	BOR1	P53838	576 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	NAM8	Q00539	523 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	YDR249C	Q03787	373 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	OSW1	Q08692	278 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	YIR021W-A	Q3E739	70 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	ECM3	Q99252	613 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	RIB3	Q99258	208 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	CTA1	P15202	515 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	NTF2	P33331	125 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	YPT35	P38815	214 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	GAT2	P40209	560 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	YFL040W	P43562	540 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	ADO1	P47143	340 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	YGR035C	P53222	116 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	YMR178W	Q03219	274 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	SEC13	Q04491	297 aa	Known RBP	3.75	□□□□□ -1.81
NUP133	YKR082W	COQ11	Q05892	277 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	YKL033W-A	Q86ZR7	236 aa		3.75	□□□□□ -1.81
NUP133	YKR082W	MF(ALPHA)1	P01149	165 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms