RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C AIM3P38266 947 aaKnown RBP8.61□□□□□ -1.03
MET28YIR017C ELA1P53861 379 aaPredicted RBP8.61□□□□□ -1.03
MET28YIR017C SRL4Q03085 281 aa8.61□□□□□ -1.03
MET28YIR017C YMR265CQ03508 461 aaKnown RBP8.61□□□□□ -1.03
MET28YIR017C PLB2Q03674 706 aa8.61□□□□□ -1.03
MET28YIR017C RRP17Q04031 235 aaPredicted RBP8.61□□□□□ -1.03
MET28YIR017C MGR3Q04472 501 aa8.61□□□□□ -1.03
MET28YIR017C RBS1Q05672 457 aaKnown RBP8.61□□□□□ -1.03
MET28YIR017C COQ11Q05892 277 aa8.61□□□□□ -1.03
MET28YIR017C FRE5Q08908 694 aa8.61□□□□□ -1.03
MET28YIR017C MED2Q12124 431 aa8.61□□□□□ -1.03
MET28YIR017C PRP8P33334 2413 aaKnown RBP8.6□□□□□ -1.03
MET28YIR017C REP1P03871 373 aa8.6□□□□□ -1.03
MET28YIR017C CDC36P06100 191 aaPredicted RBP8.6□□□□□ -1.03
MET28YIR017C BOS1P25385 244 aa8.6□□□□□ -1.03
MET28YIR017C ARO7P32178 256 aa8.6□□□□□ -1.03
MET28YIR017C ANR2P36090 516 aaPredicted RBP8.6□□□□□ -1.03
MET28YIR017C YAE1P47118 141 aaPredicted RBP8.6□□□□□ -1.03
MET28YIR017C CCC1P47818 322 aa8.6□□□□□ -1.03
MET28YIR017C ALG12P53730 551 aa8.6□□□□□ -1.03
MET28YIR017C RAF1Q06891 181 aa8.6□□□□□ -1.03
MET28YIR017C LUC7Q07508 261 aaPredicted RBP8.6□□□□□ -1.03
MET28YIR017C TY1A-NL1Q12391 440 aaKnown RBP8.6□□□□□ -1.03
MET28YIR017C NOP56Q12460 504 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
MET28YIR017C RRI1Q12468 440 aa8.6□□□□□ -1.03
MET28YIR017C FRE6Q12473 712 aa8.6□□□□□ -1.03
MET28YIR017C SCEIP03882 235 aa8.59□□□□□ -1.03
MET28YIR017C CDC31P06704 161 aaKnown RBP8.59□□□□□ -1.03
MET28YIR017C MCM1P11746 286 aa8.59□□□□□ -1.03
MET28YIR017C EXG1P23776 448 aaKnown RBP8.59□□□□□ -1.03
MET28YIR017C PAU24P38155 120 aa8.59□□□□□ -1.03
MET28YIR017C YMR262WP38430 313 aa8.59□□□□□ -1.03
MET28YIR017C CHS7P38843 316 aa8.59□□□□□ -1.03
MET28YIR017C PCL6P40038 420 aa8.59□□□□□ -1.03
MET28YIR017C RTT105P40063 208 aa8.59□□□□□ -1.03
MET28YIR017C JLP2P40206 208 aa8.59□□□□□ -1.03
MET28YIR017C RMD9P53140 646 aaKnown RBP8.59□□□□□ -1.03
MET28YIR017C MRP51Q02950 344 aa8.59□□□□□ -1.03
MET28YIR017C AIM36Q03798 255 aa8.59□□□□□ -1.03
MET28YIR017C YDR514CQ04408 483 aa8.59□□□□□ -1.03
MET28YIR017C FMP42Q04991 504 aa8.59□□□□□ -1.03
MET28YIR017C TSR2Q06672 205 aaKnown RBP8.59□□□□□ -1.03
MET28YIR017C MCM21Q06675 368 aa8.59□□□□□ -1.03
MET28YIR017C MCH4Q08268 501 aa8.59□□□□□ -1.03
MET28YIR017C YEL009C-AA0A023PZF2 135 aa8.58□□□□□ -1.04
MET28YIR017C RPS16AP0CX51 143 aaKnown RBP8.58□□□□□ -1.04
MET28YIR017C RPS16BP0CX52 143 aaKnown RBP8.58□□□□□ -1.04
MET28YIR017C PRE7P23724 241 aaKnown RBP8.58□□□□□ -1.04
MET28YIR017C MEK1P24719 497 aaPredicted RBP8.58□□□□□ -1.04
MET28YIR017C UTP11P34247 250 aaPredicted RBP8.58□□□□□ -1.04
MET28YIR017C SPT10P35208 640 aa8.58□□□□□ -1.04
MET28YIR017C RSM22P36056 628 aa8.58□□□□□ -1.04
MET28YIR017C PCP1P53259 346 aa8.58□□□□□ -1.04
MET28YIR017C PET191Q02772 108 aa8.58□□□□□ -1.04
MET28YIR017C RCF1Q03713 159 aa8.58□□□□□ -1.04
MET28YIR017C GPN3Q06543 272 aa8.58□□□□□ -1.04
MET28YIR017C HEM4P06174 275 aa8.57□□□□□ -1.04
MET28YIR017C MRP1P10662 321 aaKnown RBP8.57□□□□□ -1.04
MET28YIR017C ITR1P30605 584 aa8.57□□□□□ -1.04
MET28YIR017C DOA4P32571 926 aa8.57□□□□□ -1.04
MET28YIR017C YBR096WP38256 230 aa8.57□□□□□ -1.04
MET28YIR017C IDP2P41939 412 aa8.57□□□□□ -1.04
MET28YIR017C PMT6P42934 759 aa8.57□□□□□ -1.04
MET28YIR017C SCW11P53189 542 aa8.57□□□□□ -1.04
MET28YIR017C SSY1Q03770 852 aa8.57□□□□□ -1.04
MET28YIR017C YAP6Q03935 383 aa8.57□□□□□ -1.04
MET28YIR017C YDR387CQ04162 555 aa8.57□□□□□ -1.04
MET28YIR017C CRR1Q05790 422 aa8.57□□□□□ -1.04
MET28YIR017C TY1A-BLQ12266 440 aa8.57□□□□□ -1.04
MET28YIR017C SIR2P06700 562 aa8.56□□□□□ -1.04
MET28YIR017C PDE2P06776 526 aa8.56□□□□□ -1.04
MET28YIR017C COX9P07255 59 aa8.56□□□□□ -1.04
MET28YIR017C DBF2P22204 572 aa8.56□□□□□ -1.04
MET28YIR017C CLB2P24869 491 aa8.56□□□□□ -1.04
MET28YIR017C SED4P25365 1065 aa8.56□□□□□ -1.04
MET28YIR017C MTH1P35198 433 aa8.56□□□□□ -1.04
MET28YIR017C PEX32P38292 413 aa8.56□□□□□ -1.04
MET28YIR017C PTH1P38876 190 aaKnown RBP8.56□□□□□ -1.04
MET28YIR017C TIR3P40552 269 aa8.56□□□□□ -1.04
MET28YIR017C GPP1P41277 250 aaKnown RBP8.56□□□□□ -1.04
MET28YIR017C GDS1P41913 522 aa8.56□□□□□ -1.04
MET28YIR017C AAD14P42884 376 aa8.56□□□□□ -1.04
MET28YIR017C ACS2P52910 683 aaKnown RBP8.56□□□□□ -1.04
MET28YIR017C MTM1P53320 366 aa8.56□□□□□ -1.04
MET28YIR017C YNL165WP53891 406 aa8.56□□□□□ -1.04
MET28YIR017C ASI3P53983 676 aa8.56□□□□□ -1.04
MET28YIR017C DIG2Q03373 323 aaKnown RBP8.56□□□□□ -1.04
MET28YIR017C YLR099W-AQ3E798 87 aa8.56□□□□□ -1.04
MET28YIR017C MAK32P23060 363 aa8.55□□□□□ -1.04
MET28YIR017C SHE2P36068 246 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
MET28YIR017C GPX2P38143 162 aa8.55□□□□□ -1.04
MET28YIR017C MTC6P38849 526 aa8.55□□□□□ -1.04
MET28YIR017C YJL218WP40892 196 aaKnown RBP8.55□□□□□ -1.04
MET28YIR017C LOH1P47055 219 aa8.55□□□□□ -1.04
MET28YIR017C PMT5P52867 743 aa8.55□□□□□ -1.04
MET28YIR017C SAM50P53969 484 aa8.55□□□□□ -1.04
MET28YIR017C RCE1Q03530 315 aa8.55□□□□□ -1.04
MET28YIR017C YMR252CQ04814 134 aa8.55□□□□□ -1.04
MET28YIR017C IES3Q12345 250 aa8.55□□□□□ -1.04
MET28YIR017C RTN2Q12443 393 aa8.55□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms