RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C TGL5Q12043 749 aa5.26□□□□□ -1.57
SFB3YHR098C YIL134C-AQ45U18 67 aa5.26□□□□□ -1.57
SFB3YHR098C AI3P03877 415 aa5.25□□□□□ -1.57
SFB3YHR098C PDA1P16387 420 aaKnown RBP5.25□□□□□ -1.57
SFB3YHR098C SEC62P21825 274 aa5.25□□□□□ -1.57
SFB3YHR098C GMH1P36125 273 aa5.25□□□□□ -1.57
SFB3YHR098C ELO3P40319 345 aa5.25□□□□□ -1.57
SFB3YHR098C ALG8P40351 577 aa5.25□□□□□ -1.57
SFB3YHR098C YIL161WP40449 235 aaKnown RBP5.25□□□□□ -1.57
SFB3YHR098C SLS1P42900 643 aa5.25□□□□□ -1.57
SFB3YHR098C STE24P47154 453 aa5.25□□□□□ -1.57
SFB3YHR098C ASK10P48361 1146 aa5.25□□□□□ -1.57
SFB3YHR098C SOL1P50278 321 aa5.25□□□□□ -1.57
SFB3YHR098C AVT4P50944 713 aa5.25□□□□□ -1.57
SFB3YHR098C YGL114WP53134 725 aa5.25□□□□□ -1.57
SFB3YHR098C STD1Q02794 444 aa5.25□□□□□ -1.57
SFB3YHR098C CUE4Q04201 117 aaPredicted RBP5.25□□□□□ -1.57
SFB3YHR098C YMR253CQ04835 414 aa5.25□□□□□ -1.57
SFB3YHR098C SNO4Q04902 237 aa5.25□□□□□ -1.57
SFB3YHR098C SDO1Q07953 250 aaKnown RBP5.25□□□□□ -1.57
SFB3YHR098C HSP33Q08914 237 aaKnown RBP5.25□□□□□ -1.57
SFB3YHR098C HSP32Q08992 237 aa5.25□□□□□ -1.57
SFB3YHR098C PUT1P09368 476 aa5.25□□□□□ -1.57
SFB3YHR098C MSK1P32048 576 aa5.25□□□□□ -1.57
SFB3YHR098C RPD3P32561 433 aa5.25□□□□□ -1.57
SFB3YHR098C SKN1P33336 771 aa5.25□□□□□ -1.57
SFB3YHR098C COS9P36034 407 aa5.25□□□□□ -1.57
SFB3YHR098C ARO9P38840 513 aaPredicted RBP5.25□□□□□ -1.57
SFB3YHR098C PSD1P39006 500 aa5.25□□□□□ -1.57
SFB3YHR098C YEL057CP39983 233 aa5.25□□□□□ -1.57
SFB3YHR098C LEE1Q02799 301 aaKnown RBP5.25□□□□□ -1.57
SFB3YHR098C TY1A-DR2Q03964 440 aaKnown RBP5.25□□□□□ -1.57
SFB3YHR098C YMR252CQ04814 134 aa5.25□□□□□ -1.57
SFB3YHR098C KEI1Q06346 221 aa5.25□□□□□ -1.57
SFB3YHR098C CRT10Q08226 957 aa5.25□□□□□ -1.57
SFB3YHR098C PAR32Q12515 295 aaKnown RBP5.25□□□□□ -1.57
SFB3YHR098C RPL9AP05738 191 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C ADH3P07246 375 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C AHC2P25649 128 aa5.24□□□□□ -1.57
SFB3YHR098C NTF2P33331 125 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C DOA1P36037 715 aa5.24□□□□□ -1.57
SFB3YHR098C PRM9P39551 298 aa5.24□□□□□ -1.57
SFB3YHR098C ADO1P47143 340 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C BUL1P48524 976 aa5.24□□□□□ -1.57
SFB3YHR098C RPL9BP51401 191 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C RPN14P53196 417 aa5.24□□□□□ -1.57
SFB3YHR098C TY1A-MR1Q04215 440 aa5.24□□□□□ -1.57
SFB3YHR098C SEC13Q04491 297 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C YLR040CQ07988 224 aa5.24□□□□□ -1.57
SFB3YHR098C NDD1Q08887 554 aa5.24□□□□□ -1.57
SFB3YHR098C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
SFB3YHR098C TY1A-BLQ12266 440 aa5.24□□□□□ -1.57
SFB3YHR098C RRP42Q12277 265 aaPredicted RBP5.24□□□□□ -1.57
SFB3YHR098C ATG15P25641 520 aa5.24□□□□□ -1.57
SFB3YHR098C MCR1P36060 302 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C IRC24P40580 263 aa5.24□□□□□ -1.57
SFB3YHR098C TES1P41903 349 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C LYS5P50113 272 aa5.24□□□□□ -1.57
SFB3YHR098C TIM21P53220 239 aa5.24□□□□□ -1.57
SFB3YHR098C NRK1P53915 240 aa5.24□□□□□ -1.57
SFB3YHR098C CYT2Q00873 224 aa5.24□□□□□ -1.57
SFB3YHR098C CWC27Q02770 301 aa5.24□□□□□ -1.57
SFB3YHR098C RBS1Q05672 457 aaKnown RBP5.24□□□□□ -1.57
SFB3YHR098C SRN2Q99176 213 aa5.24□□□□□ -1.57
SFB3YHR098C EXG1P23776 448 aaKnown RBP5.23□□□□□ -1.57
SFB3YHR098C CHL4P38907 458 aa5.23□□□□□ -1.57
SFB3YHR098C EMC5P40540 141 aa5.23□□□□□ -1.57
SFB3YHR098C SPO74P45819 413 aa5.23□□□□□ -1.57
SFB3YHR098C MTC3P53077 123 aa5.23□□□□□ -1.57
SFB3YHR098C MDM34P53083 459 aa5.23□□□□□ -1.57
SFB3YHR098C PRM1P53835 661 aa5.23□□□□□ -1.57
SFB3YHR098C UTP15Q04305 513 aaKnown RBP5.23□□□□□ -1.57
SFB3YHR098C RPC11Q04307 110 aaPredicted RBP5.23□□□□□ -1.57
SFB3YHR098C MRX9Q07349 420 aaKnown RBP5.23□□□□□ -1.57
SFB3YHR098C TFC7Q12415 435 aa5.23□□□□□ -1.57
SFB3YHR098C YLR149CQ99296 730 aa5.23□□□□□ -1.57
SFB3YHR098C YMR084WA2P2R3 262 aa5.23□□□□□ -1.57
SFB3YHR098C HTB1P02293 131 aaKnown RBP5.23□□□□□ -1.57
SFB3YHR098C HTB2P02294 131 aa5.23□□□□□ -1.57
SFB3YHR098C ADE8P04161 214 aa5.23□□□□□ -1.57
SFB3YHR098C HTS1P07263 546 aaKnown RBP5.23□□□□□ -1.57
SFB3YHR098C PHO2P07269 559 aa5.23□□□□□ -1.57
SFB3YHR098C YML003WP0CF16 290 aa5.23□□□□□ -1.57
SFB3YHR098C URA6P15700 204 aa5.23□□□□□ -1.57
SFB3YHR098C SUR1P33300 382 aa5.23□□□□□ -1.57
SFB3YHR098C EMC3P36039 253 aa5.23□□□□□ -1.57
SFB3YHR098C FLX1P40464 311 aa5.23□□□□□ -1.57
SFB3YHR098C MRX6P48564 524 aa5.23□□□□□ -1.57
SFB3YHR098C COG7P53195 279 aa5.23□□□□□ -1.57
SFB3YHR098C AAH1P53909 347 aa5.23□□□□□ -1.57
SFB3YHR098C YDR415CQ04033 374 aaPredicted RBP5.23□□□□□ -1.57
SFB3YHR098C ELP6Q04868 273 aa5.23□□□□□ -1.57
SFB3YHR098C BOP2Q06150 570 aa5.23□□□□□ -1.57
SFB3YHR098C FRE6Q12473 712 aa5.23□□□□□ -1.57
SFB3YHR098C GPI12P23797 304 aa5.22□□□□□ -1.57
SFB3YHR098C COQ3P27680 312 aa5.22□□□□□ -1.57
SFB3YHR098C HXT4P32467 576 aa5.22□□□□□ -1.57
SFB3YHR098C MDL1P33310 695 aa5.22□□□□□ -1.57
SFB3YHR098C ADD66P36040 267 aa5.22□□□□□ -1.57
SFB3YHR098C PAU24P38155 120 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms