RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W PEX22P39718 180 aa4.02□□□□□ -1.77
DEG1YFL001W PRP38Q00723 242 aaPredicted RBP4.02□□□□□ -1.77
DEG1YFL001W VBA1Q04301 562 aa4.02□□□□□ -1.77
DEG1YFL001W RSA1Q08932 381 aa4.02□□□□□ -1.77
DEG1YFL001W POM33Q12164 279 aa4.02□□□□□ -1.77
DEG1YFL001W ERD1P16151 362 aa4.01□□□□□ -1.77
DEG1YFL001W OSM1P21375 501 aaKnown RBP4.01□□□□□ -1.77
DEG1YFL001W DAL82P21705 255 aa4.01□□□□□ -1.77
DEG1YFL001W CPR3P25719 182 aa4.01□□□□□ -1.77
DEG1YFL001W DEP1P31385 405 aa4.01□□□□□ -1.77
DEG1YFL001W PRS1P32895 427 aaKnown RBP4.01□□□□□ -1.77
DEG1YFL001W SLT2Q00772 484 aa4.01□□□□□ -1.77
DEG1YFL001W SCS7Q03529 384 aa4.01□□□□□ -1.77
DEG1YFL001W ADH6Q04894 360 aaKnown RBP4.01□□□□□ -1.77
DEG1YFL001W RPN8Q08723 338 aaKnown RBP4.01□□□□□ -1.77
DEG1YFL001W ATG31Q12421 196 aa4.01□□□□□ -1.77
DEG1YFL001W CDC42P19073 191 aa4□□□□□ -1.77
DEG1YFL001W VPS1P21576 704 aaKnown RBP4□□□□□ -1.77
DEG1YFL001W URA10P30402 227 aa4□□□□□ -1.77
DEG1YFL001W ZIP1P31111 875 aa4□□□□□ -1.77
DEG1YFL001W MSN4P33749 630 aa4□□□□□ -1.77
DEG1YFL001W PRS4P38063 326 aaPredicted RBP4□□□□□ -1.77
DEG1YFL001W RCK1P38622 512 aa4□□□□□ -1.77
DEG1YFL001W DED81P38707 554 aaKnown RBP4□□□□□ -1.77
DEG1YFL001W NPT1P39683 429 aaKnown RBP4□□□□□ -1.77
DEG1YFL001W OXA1P39952 402 aa4□□□□□ -1.77
DEG1YFL001W YER085CP40058 173 aa4□□□□□ -1.77
DEG1YFL001W YIA6P40556 373 aa4□□□□□ -1.77
DEG1YFL001W VHT1P53241 593 aa4□□□□□ -1.77
DEG1YFL001W CPD1P53314 239 aa4□□□□□ -1.77
DEG1YFL001W ALG11P53954 548 aaKnown RBP4□□□□□ -1.77
DEG1YFL001W YLR446WQ06204 433 aa4□□□□□ -1.77
DEG1YFL001W SDO1Q07953 250 aaKnown RBP4□□□□□ -1.77
DEG1YFL001W RRP42Q12277 265 aaPredicted RBP4□□□□□ -1.77
DEG1YFL001W YPR064WQ12492 139 aa4□□□□□ -1.77
DEG1YFL001W YBL111CQ3E7Y5 667 aa4□□□□□ -1.77
DEG1YFL001W APC1P53886 1748 aa4□□□□□ -1.77
DEG1YFL001W FKS3Q04952 1785 aa4□□□□□ -1.77
DEG1YFL001W TFS1P14306 219 aa3.99□□□□□ -1.77
DEG1YFL001W AAT2P23542 418 aaKnown RBP3.99□□□□□ -1.77
DEG1YFL001W MRPL6P32904 214 aa3.99□□□□□ -1.77
DEG1YFL001W BIG1P38813 335 aa3.99□□□□□ -1.77
DEG1YFL001W BAT1P38891 393 aaKnown RBP3.99□□□□□ -1.77
DEG1YFL001W AIM10P39965 576 aaKnown RBP3.99□□□□□ -1.77
DEG1YFL001W TPC1P53257 314 aa3.99□□□□□ -1.77
DEG1YFL001W YET2Q04210 160 aa3.99□□□□□ -1.77
DEG1YFL001W YOR029WQ12243 111 aa3.99□□□□□ -1.77
DEG1YFL001W URB1P34241 1764 aaKnown RBP3.99□□□□□ -1.77
DEG1YFL001W STE7P06784 515 aa3.98□□□□□ -1.77
DEG1YFL001W YCR016WP25617 290 aaKnown RBP3.98□□□□□ -1.77
DEG1YFL001W INO2P26798 304 aa3.98□□□□□ -1.77
DEG1YFL001W SUA5P32579 426 aa3.98□□□□□ -1.77
DEG1YFL001W CSE1P33307 960 aa3.98□□□□□ -1.77
DEG1YFL001W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
DEG1YFL001W YKL071WP36086 256 aa3.98□□□□□ -1.77
DEG1YFL001W PET8P38921 284 aa3.98□□□□□ -1.77
DEG1YFL001W YJR054WP47114 497 aa3.98□□□□□ -1.77
DEG1YFL001W YPT32P51996 222 aaKnown RBP3.98□□□□□ -1.77
DEG1YFL001W CDH1P53197 566 aa3.98□□□□□ -1.77
DEG1YFL001W YGR015CP53208 328 aa3.98□□□□□ -1.77
DEG1YFL001W IMP4P53941 290 aaKnown RBP3.98□□□□□ -1.77
DEG1YFL001W KTR6P54070 446 aa3.98□□□□□ -1.77
DEG1YFL001W YLR283WQ05867 314 aa3.98□□□□□ -1.77
DEG1YFL001W YLR177WQ06251 628 aa3.98□□□□□ -1.77
DEG1YFL001W SAC3P46674 1301 aa3.98□□□□□ -1.77
DEG1YFL001W SNF2P22082 1703 aa3.98□□□□□ -1.77
DEG1YFL001W HIS1P00498 297 aaKnown RBP3.97□□□□□ -1.77
DEG1YFL001W MRP1P10662 321 aaKnown RBP3.97□□□□□ -1.77
DEG1YFL001W CBF5P33322 483 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
DEG1YFL001W SHE1P38200 338 aa3.97□□□□□ -1.77
DEG1YFL001W TCD1P38756 429 aa3.97□□□□□ -1.77
DEG1YFL001W DDI1P40087 428 aa3.97□□□□□ -1.77
DEG1YFL001W TAD2P47058 250 aa3.97□□□□□ -1.77
DEG1YFL001W CDC14Q00684 551 aa3.97□□□□□ -1.77
DEG1YFL001W OST6Q03723 332 aa3.97□□□□□ -1.77
DEG1YFL001W ENT5Q03769 411 aaKnown RBP3.97□□□□□ -1.77
DEG1YFL001W TAZ1Q06510 381 aa3.97□□□□□ -1.77
DEG1YFL001W PAM18Q07914 168 aa3.97□□□□□ -1.77
DEG1YFL001W YIL177CP40434 1758 aa3.97□□□□□ -1.77
DEG1YFL001W YJL225CP40889 1758 aa3.97□□□□□ -1.77
DEG1YFL001W YRF1-3P0CX14 1859 aa3.97□□□□□ -1.77
DEG1YFL001W YRF1-7P0CX15 1859 aa3.97□□□□□ -1.77
DEG1YFL001W YRF1-6P53819 1859 aa3.97□□□□□ -1.77
DEG1YFL001W RPB4P20433 221 aaPredicted RBP3.96□□□□□ -1.77
DEG1YFL001W CDC50P25656 391 aa3.96□□□□□ -1.77
DEG1YFL001W SPT4P32914 102 aaPredicted RBP3.96□□□□□ -1.77
DEG1YFL001W BMH2P34730 273 aaKnown RBP3.96□□□□□ -1.77
DEG1YFL001W YKT6P36015 200 aaKnown RBP3.96□□□□□ -1.77
DEG1YFL001W MRPL10P36520 322 aa3.96□□□□□ -1.77
DEG1YFL001W OM14P38325 134 aa3.96□□□□□ -1.77
DEG1YFL001W TIM17P39515 158 aa3.96□□□□□ -1.77
DEG1YFL001W MIG3P39943 394 aa3.96□□□□□ -1.77
DEG1YFL001W YPI1P43587 155 aa3.96□□□□□ -1.77
DEG1YFL001W TLG2Q08144 397 aa3.96□□□□□ -1.77
DEG1YFL001W BI3Q9ZZW7 517 aa3.96□□□□□ -1.77
DEG1YFL001W LYS2P07702 1392 aa3.96□□□□□ -1.78
DEG1YFL001W MRPL20P22354 195 aaPredicted RBP3.95□□□□□ -1.78
DEG1YFL001W IFM1P25038 676 aa3.95□□□□□ -1.78
DEG1YFL001W POF1P25576 258 aa3.95□□□□□ -1.78
DEG1YFL001W KRE6P32486 720 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms