RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W CDC9P04819 755 aa5.47□□□□□ -1.53
RPT3YDR394W KIN28P06242 306 aa5.47□□□□□ -1.53
RPT3YDR394W RAD52P06778 471 aaKnown RBP5.47□□□□□ -1.53
RPT3YDR394W NHP6BP11633 99 aaKnown RBP5.47□□□□□ -1.53
RPT3YDR394W YPK2P18961 677 aa5.47□□□□□ -1.53
RPT3YDR394W HCM1P25364 564 aa5.47□□□□□ -1.53
RPT3YDR394W IMG1P25626 169 aa5.47□□□□□ -1.53
RPT3YDR394W PRE2P30656 287 aaKnown RBP5.47□□□□□ -1.53
RPT3YDR394W DCG1P32460 244 aa5.47□□□□□ -1.53
RPT3YDR394W NRP1P32770 719 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
RPT3YDR394W SFK1P35735 353 aa5.47□□□□□ -1.53
RPT3YDR394W MRPL15P36523 253 aa5.47□□□□□ -1.53
RPT3YDR394W CHK1P38147 527 aa5.47□□□□□ -1.53
RPT3YDR394W YBR238CP38330 731 aaKnown RBP5.47□□□□□ -1.53
RPT3YDR394W PTH1P38876 190 aaKnown RBP5.47□□□□□ -1.53
RPT3YDR394W PHO90P39535 881 aa5.47□□□□□ -1.53
RPT3YDR394W YER184CP39961 794 aa5.47□□□□□ -1.53
RPT3YDR394W FMP52P40008 231 aa5.47□□□□□ -1.53
RPT3YDR394W SNX4P47057 423 aa5.47□□□□□ -1.53
RPT3YDR394W DOC1P53068 250 aa5.47□□□□□ -1.53
RPT3YDR394W OGG1P53397 376 aaPredicted RBP5.47□□□□□ -1.53
RPT3YDR394W YMR252CQ04814 134 aa5.47□□□□□ -1.53
RPT3YDR394W UTP21Q06078 939 aaPredicted RBP5.47□□□□□ -1.53
RPT3YDR394W PEX30Q06169 523 aa5.47□□□□□ -1.53
RPT3YDR394W TAZ1Q06510 381 aa5.47□□□□□ -1.53
RPT3YDR394W AIM6Q07716 390 aa5.47□□□□□ -1.53
RPT3YDR394W REX3Q12090 404 aa5.47□□□□□ -1.53
RPT3YDR394W BAG7Q12128 409 aa5.47□□□□□ -1.53
RPT3YDR394W RTR2Q12378 196 aa5.47□□□□□ -1.53
RPT3YDR394W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
RPT3YDR394W CCH1P50077 2039 aa5.47□□□□□ -1.53
RPT3YDR394W RPL20AP0CX23 172 aaKnown RBP5.46□□□□□ -1.54
RPT3YDR394W RPL20BP0CX24 172 aaPredicted RBP5.46□□□□□ -1.54
RPT3YDR394W PDA1P16387 420 aaKnown RBP5.46□□□□□ -1.54
RPT3YDR394W CDC23P16522 626 aa5.46□□□□□ -1.54
RPT3YDR394W BOS1P25385 244 aa5.46□□□□□ -1.54
RPT3YDR394W PRE4P30657 266 aa5.46□□□□□ -1.54
RPT3YDR394W ATS1P31386 333 aa5.46□□□□□ -1.54
RPT3YDR394W RNP1P32385 249 aa5.46□□□□□ -1.54
RPT3YDR394W SLC1P33333 303 aa5.46□□□□□ -1.54
RPT3YDR394W RPS27AP35997 82 aaKnown RBP5.46□□□□□ -1.54
RPT3YDR394W RPS27BP38711 82 aa5.46□□□□□ -1.54
RPT3YDR394W NSG1P38837 291 aa5.46□□□□□ -1.54
RPT3YDR394W VPS52P39904 641 aa5.46□□□□□ -1.54
RPT3YDR394W SMB1P40018 196 aaKnown RBP5.46□□□□□ -1.54
RPT3YDR394W YIL086CP40503 102 aa5.46□□□□□ -1.54
RPT3YDR394W HXT9P40885 567 aa5.46□□□□□ -1.54
RPT3YDR394W PAM16P42949 149 aa5.46□□□□□ -1.54
RPT3YDR394W AIM25P47140 327 aa5.46□□□□□ -1.54
RPT3YDR394W YJR141WP47172 347 aaPredicted RBP5.46□□□□□ -1.54
RPT3YDR394W CCC1P47818 322 aa5.46□□□□□ -1.54
RPT3YDR394W YGL204CP53089 101 aa5.46□□□□□ -1.54
RPT3YDR394W GPG1P53130 126 aa5.46□□□□□ -1.54
RPT3YDR394W MPP6P53725 186 aaPredicted RBP5.46□□□□□ -1.54
RPT3YDR394W YLR460CP54007 376 aa5.46□□□□□ -1.54
RPT3YDR394W HXT11P54862 567 aa5.46□□□□□ -1.54
RPT3YDR394W YVH1Q02256 364 aaKnown RBP5.46□□□□□ -1.54
RPT3YDR394W MRPL1Q04599 285 aa5.46□□□□□ -1.54
RPT3YDR394W MRPL51Q06090 140 aaPredicted RBP5.46□□□□□ -1.54
RPT3YDR394W DIC1Q06143 298 aa5.46□□□□□ -1.54
RPT3YDR394W KEI1Q06346 221 aa5.46□□□□□ -1.54
RPT3YDR394W CYK3Q07533 885 aa5.46□□□□□ -1.54
RPT3YDR394W COQ10Q08058 207 aa5.46□□□□□ -1.54
RPT3YDR394W YNG1Q08465 219 aa5.46□□□□□ -1.54
RPT3YDR394W PIN2Q12057 282 aa5.46□□□□□ -1.54
RPT3YDR394W BBP1Q12365 385 aa5.46□□□□□ -1.54
RPT3YDR394W YPR117WQ06116 2489 aa5.46□□□□□ -1.54
RPT3YDR394W GPI12P23797 304 aa5.45□□□□□ -1.54
RPT3YDR394W YCR016WP25617 290 aaKnown RBP5.45□□□□□ -1.54
RPT3YDR394W CWP1P28319 239 aa5.45□□□□□ -1.54
RPT3YDR394W MDH3P32419 343 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
RPT3YDR394W SHM2P37291 469 aaKnown RBP5.45□□□□□ -1.54
RPT3YDR394W APL3P38065 1025 aa5.45□□□□□ -1.54
RPT3YDR394W PEX32P38292 413 aa5.45□□□□□ -1.54
RPT3YDR394W FET3P38993 636 aa5.45□□□□□ -1.54
RPT3YDR394W YIL152WP40455 235 aa5.45□□□□□ -1.54
RPT3YDR394W UTP25P40498 721 aaKnown RBP5.45□□□□□ -1.54
RPT3YDR394W POP1P41812 875 aa5.45□□□□□ -1.54
RPT3YDR394W GTF1P53260 183 aaPredicted RBP5.45□□□□□ -1.54
RPT3YDR394W SAY1P53324 424 aa5.45□□□□□ -1.54
RPT3YDR394W RHO5P53879 331 aaKnown RBP5.45□□□□□ -1.54
RPT3YDR394W NGL2Q03264 515 aaKnown RBP5.45□□□□□ -1.54
RPT3YDR394W YMR210WQ03649 449 aa5.45□□□□□ -1.54
RPT3YDR394W BNA5Q05979 453 aa5.45□□□□□ -1.54
RPT3YDR394W RXT3Q07458 294 aa5.45□□□□□ -1.54
RPT3YDR394W ENB1Q08299 606 aa5.45□□□□□ -1.54
RPT3YDR394W BTS1Q12051 335 aa5.45□□□□□ -1.54
RPT3YDR394W MCP1Q12106 302 aa5.45□□□□□ -1.54
RPT3YDR394W RTC5Q12108 567 aaKnown RBP5.45□□□□□ -1.54
RPT3YDR394W RLM1Q12224 676 aa5.45□□□□□ -1.54
RPT3YDR394W NPC2Q12408 173 aa5.45□□□□□ -1.54
RPT3YDR394W HTZ1Q12692 134 aaKnown RBP5.45□□□□□ -1.54
RPT3YDR394W YSF3P0C074 85 aaPredicted RBP5.44□□□□□ -1.54
RPT3YDR394W MXR2P25566 168 aa5.44□□□□□ -1.54
RPT3YDR394W STP22P25604 385 aa5.44□□□□□ -1.54
RPT3YDR394W PAD1P33751 242 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
RPT3YDR394W SDS24P38314 527 aa5.44□□□□□ -1.54
RPT3YDR394W OCA5P38738 679 aa5.44□□□□□ -1.54
RPT3YDR394W RRF1P38771 230 aa5.44□□□□□ -1.54
RPT3YDR394W SER3P40054 469 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms