RNA–Protein interactions for RNA: YCR024C-A

PMP1, Transcript of Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p, yeast

Gene PMP1, Length 123 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMP1	YCR024C-A	DPP1	Q05521	289 aa		0.64	□□□□□ -2.31
PMP1	YCR024C-A	RRG8	Q06109	277 aa		0.64	□□□□□ -2.31
PMP1	YCR024C-A	DXO1	Q06349	442 aa		0.64	□□□□□ -2.31
PMP1	YCR024C-A	TAZ1	Q06510	381 aa		0.64	□□□□□ -2.31
PMP1	YCR024C-A	BER1	Q06688	274 aa	Known RBP	0.64	□□□□□ -2.31
PMP1	YCR024C-A	RLP24	Q07915	199 aa	Known RBP	0.64	□□□□□ -2.31
PMP1	YCR024C-A	YPL264C	Q08980	353 aa		0.64	□□□□□ -2.31
PMP1	YCR024C-A	APC9	Q12107	265 aa		0.64	□□□□□ -2.31
PMP1	YCR024C-A	PER33	Q12144	273 aa		0.64	□□□□□ -2.31
PMP1	YCR024C-A	PRP46	Q12417	451 aa	Predicted RBP	0.64	□□□□□ -2.31
PMP1	YCR024C-A	MRX4	Q12467	430 aa		0.64	□□□□□ -2.31
PMP1	YCR024C-A	YEL009C-A	A0A023PZF2	135 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	DAL5	P15365	543 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	OSM1	P21375	501 aa	Known RBP	0.63	□□□□□ -2.31
PMP1	YCR024C-A	MEK1	P24719	497 aa	Predicted RBP	0.63	□□□□□ -2.31
PMP1	YCR024C-A	KRE6	P32486	720 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	YKR032W	P36127	104 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	YBL081W	P38180	368 aa	Known RBP	0.63	□□□□□ -2.31
PMP1	YCR024C-A	YBR062C	P38239	180 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	VAB2	P40003	282 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	AVT6	P40074	448 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	YER188W	P40103	239 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	SYS1	P41544	203 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	YFR045W	P43617	309 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	YJL144W	P47009	104 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	PEX31	P53203	462 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	TIM21	P53220	239 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	BIO4	P53630	237 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	YNL260C	P53846	198 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	SWT21	P53873	357 aa	Predicted RBP	0.63	□□□□□ -2.31
PMP1	YCR024C-A	YNL040W	P53960	456 aa	Predicted RBP	0.63	□□□□□ -2.31
PMP1	YCR024C-A	YPL113C	Q02961	396 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	SPO19	Q03029	223 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	TAF9	Q05027	157 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	BCP1	Q06338	283 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	DIB1	Q06819	143 aa	Predicted RBP	0.63	□□□□□ -2.31
PMP1	YCR024C-A	HRT1	Q08273	121 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	TIM22	Q12328	207 aa		0.63	□□□□□ -2.31
PMP1	YCR024C-A	NUP157	P40064	1391 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	HIS1	P00498	297 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	MET2	P08465	486 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	YOL163W	P0CF20	169 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	MRP1	P10662	321 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	MSS116	P15424	664 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	CDC42	P19073	191 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	PHO80	P20052	293 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	PRE7	P23724	241 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	YCR025C	P25352	136 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	CAM1	P29547	415 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	VPH2	P32341	215 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	AEP1	P32493	518 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	SUA5	P32579	426 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	UTR5	P32630	166 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	AGA2	P32781	87 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	ALK2	P32789	676 aa	Predicted RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	CAT2	P32796	670 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	EBP2	P36049	427 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	CAB3	P36076	571 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	YKL070W	P36087	169 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	MRPL37	P36532	105 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	POP8	P38208	133 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	SPL2	P38839	148 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	SHQ1	P40486	507 aa	Predicted RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	GDS1	P41913	522 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	TAD2	P47058	250 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	YPT32	P51996	222 aa	Known RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	YGL185C	P53100	379 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	MND1	P53102	219 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	LIF1	P53150	421 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	SPP2	Q02521	185 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	YML018C	Q03730	393 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	ERV41	Q04651	352 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	GTO3	Q04806	366 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	SFH1	Q06168	426 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	CDD1	Q06549	142 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	CTR3	Q06686	241 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	YLL007C	Q07799	665 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	YOL019W	Q08157	551 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	SLD7	Q08457	257 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	BTS1	Q12051	335 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	PST1	Q12355	444 aa		0.62	□□□□□ -2.31
PMP1	YCR024C-A	SSK22	P25390	1331 aa	Predicted RBP	0.62	□□□□□ -2.31
PMP1	YCR024C-A	RPL24A	P04449	155 aa	Known RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	SSA3	P09435	649 aa	Known RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	RPL4A	P10664	362 aa	Known RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	OM45	P16547	393 aa		0.61	□□□□□ -2.31
PMP1	YCR024C-A	DBP3	P20447	523 aa	Known RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	RSA4	P25382	515 aa	Known RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	MIG1	P27705	504 aa		0.61	□□□□□ -2.31
PMP1	YCR024C-A	ERG2	P32352	222 aa		0.61	□□□□□ -2.31
PMP1	YCR024C-A	TRM7	P38238	310 aa	Known RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	MED8	P38304	223 aa		0.61	□□□□□ -2.31
PMP1	YCR024C-A	PEX18	P38855	283 aa		0.61	□□□□□ -2.31
PMP1	YCR024C-A	SPT8	P38915	602 aa		0.61	□□□□□ -2.31
PMP1	YCR024C-A	VPS45	P38932	577 aa		0.61	□□□□□ -2.31
PMP1	YCR024C-A	SMC2	P38989	1170 aa	Known RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	CDC40	P40968	455 aa	Predicted RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	MPP10	P47083	593 aa	Known RBP	0.61	□□□□□ -2.31
PMP1	YCR024C-A	DSK2	P48510	373 aa		0.61	□□□□□ -2.31
PMP1	YCR024C-A	RPL4B	P49626	362 aa	Known RBP	0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms