RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W RRP42Q12277 265 aaPredicted RBP1.89□□□□□ -2.11
YCL020WYCL020W MDY2Q12285 212 aa1.89□□□□□ -2.11
YCL020WYCL020W ATG5Q12380 294 aa1.89□□□□□ -2.11
YCL020WYCL020W YPR064WQ12492 139 aa1.89□□□□□ -2.11
YCL020WYCL020W PHO80P20052 293 aa1.88□□□□□ -2.11
YCL020WYCL020W RPL5P26321 297 aaKnown RBP1.88□□□□□ -2.11
YCL020WYCL020W YHL044WP38727 235 aa1.88□□□□□ -2.11
YCL020WYCL020W MNN9P39107 395 aaKnown RBP1.88□□□□□ -2.11
YCL020WYCL020W SEN34P39707 275 aa1.88□□□□□ -2.11
YCL020WYCL020W AVT6P40074 448 aa1.88□□□□□ -2.11
YCL020WYCL020W SCC4P40090 624 aa1.88□□□□□ -2.11
YCL020WYCL020W CDC40P40968 455 aaPredicted RBP1.88□□□□□ -2.11
YCL020WYCL020W VOA1P53262 265 aa1.88□□□□□ -2.11
YCL020WYCL020W SWT21P53873 357 aaPredicted RBP1.88□□□□□ -2.11
YCL020WYCL020W NNT1Q05874 261 aa1.88□□□□□ -2.11
YCL020WYCL020W RRG8Q06109 277 aa1.88□□□□□ -2.11
YCL020WYCL020W VPS1P21576 704 aaKnown RBP1.87□□□□□ -2.11
YCL020WYCL020W RPS0AP32905 252 aaKnown RBP1.87□□□□□ -2.11
YCL020WYCL020W RPC37P36121 282 aa1.87□□□□□ -2.11
YCL020WYCL020W LIF1P53150 421 aa1.87□□□□□ -2.11
YCL020WYCL020W RDS3Q06835 107 aaPredicted RBP1.87□□□□□ -2.11
YCL020WYCL020W SIA1Q12212 622 aa1.87□□□□□ -2.11
YCL020WYCL020W IFM1P25038 676 aa1.86□□□□□ -2.11
YCL020WYCL020W KRR1P25586 316 aaPredicted RBP1.86□□□□□ -2.11
YCL020WYCL020W CSM1P25651 190 aa1.86□□□□□ -2.11
YCL020WYCL020W COT1P32798 439 aa1.86□□□□□ -2.11
YCL020WYCL020W YKL063CP35725 167 aa1.86□□□□□ -2.11
YCL020WYCL020W PCL7P40186 285 aa1.86□□□□□ -2.11
YCL020WYCL020W GCD14P46959 383 aaPredicted RBP1.86□□□□□ -2.11
YCL020WYCL020W COX16P47081 118 aa1.86□□□□□ -2.11
YCL020WYCL020W YGL185CP53100 379 aa1.86□□□□□ -2.11
YCL020WYCL020W PNC1P53184 216 aaKnown RBP1.86□□□□□ -2.11
YCL020WYCL020W SYF2P53277 215 aaPredicted RBP1.86□□□□□ -2.11
YCL020WYCL020W YPL039WQ03080 316 aa1.86□□□□□ -2.11
YCL020WYCL020W YMR166CQ03829 368 aa1.86□□□□□ -2.11
YCL020WYCL020W MGR3Q04472 501 aa1.86□□□□□ -2.11
YCL020WYCL020W LOA1Q06508 300 aa1.86□□□□□ -2.11
YCL020WYCL020W TIM22Q12328 207 aa1.86□□□□□ -2.11
YCL020WYCL020W GCD2P12754 651 aaPredicted RBP1.85□□□□□ -2.11
YCL020WYCL020W TFS1P14306 219 aa1.85□□□□□ -2.11
YCL020WYCL020W RSA4P25382 515 aaKnown RBP1.85□□□□□ -2.11
YCL020WYCL020W AEP1P32493 518 aa1.85□□□□□ -2.11
YCL020WYCL020W SHQ1P40486 507 aaPredicted RBP1.85□□□□□ -2.11
YCL020WYCL020W YPT32P51996 222 aaKnown RBP1.85□□□□□ -2.11
YCL020WYCL020W YDL144CQ07589 356 aa1.85□□□□□ -2.11
YCL020WYCL020W HIS3P06633 220 aa1.84□□□□□ -2.12
YCL020WYCL020W PET494P07390 489 aaPredicted RBP1.84□□□□□ -2.12
YCL020WYCL020W POP8P38208 133 aa1.84□□□□□ -2.12
YCL020WYCL020W TRM7P38238 310 aaKnown RBP1.84□□□□□ -2.12
YCL020WYCL020W ATG12P38316 186 aa1.84□□□□□ -2.12
YCL020WYCL020W AGP3P43548 558 aa1.84□□□□□ -2.12
YCL020WYCL020W FMP41P53889 259 aaKnown RBP1.84□□□□□ -2.12
YCL020WYCL020W YNL095CP53932 642 aa1.84□□□□□ -2.12
YCL020WYCL020W YMR209CQ03648 457 aa1.84□□□□□ -2.12
YCL020WYCL020W ECM18Q04623 453 aa1.84□□□□□ -2.12
YCL020WYCL020W CDD1Q06549 142 aa1.84□□□□□ -2.12
YCL020WYCL020W YOL019WQ08157 551 aa1.84□□□□□ -2.12
YCL020WYCL020W TDH1P00360 332 aaKnown RBP1.83□□□□□ -2.12
YCL020WYCL020W ATP6P00854 259 aa1.83□□□□□ -2.12
YCL020WYCL020W GAL7P08431 366 aa1.83□□□□□ -2.12
YCL020WYCL020W SNF6P18888 332 aa1.83□□□□□ -2.12
YCL020WYCL020W SAR1P20606 190 aaKnown RBP1.83□□□□□ -2.12
YCL020WYCL020W GCG1P32656 232 aaKnown RBP1.83□□□□□ -2.12
YCL020WYCL020W RPC25P35718 212 aa1.83□□□□□ -2.12
YCL020WYCL020W YIA6P40556 373 aa1.83□□□□□ -2.12
YCL020WYCL020W CDC14Q00684 551 aa1.83□□□□□ -2.12
YCL020WYCL020W YPL077CQ02831 240 aa1.83□□□□□ -2.12
YCL020WYCL020W YML018CQ03730 393 aa1.83□□□□□ -2.12
YCL020WYCL020W AGC1Q12482 902 aa1.83□□□□□ -2.12
YCL020WYCL020W COY1P34237 679 aa1.82□□□□□ -2.12
YCL020WYCL020W CAB3P36076 571 aa1.82□□□□□ -2.12
YCL020WYCL020W RPE1P46969 238 aa1.82□□□□□ -2.12
YCL020WYCL020W LOH1P47055 219 aa1.82□□□□□ -2.12
YCL020WYCL020W PEX31P53203 462 aa1.82□□□□□ -2.12
YCL020WYCL020W CTS2Q06350 511 aa1.82□□□□□ -2.12
YCL020WYCL020W YLL007CQ07799 665 aa1.82□□□□□ -2.12
YCL020WYCL020W YBL112CQ3E7Y4 105 aa1.82□□□□□ -2.12
YCL020WYCL020W UGA1P17649 471 aa1.81□□□□□ -2.12
YCL020WYCL020W SUA5P32579 426 aa1.81□□□□□ -2.12
YCL020WYCL020W CAT2P32796 670 aaKnown RBP1.81□□□□□ -2.12
YCL020WYCL020W PHO89P38361 574 aa1.81□□□□□ -2.12
YCL020WYCL020W ARN2P38724 620 aa1.81□□□□□ -2.12
YCL020WYCL020W MPP10P47083 593 aaKnown RBP1.81□□□□□ -2.12
YCL020WYCL020W YJR146WP47174 117 aa1.81□□□□□ -2.12
YCL020WYCL020W GTO1P48239 356 aa1.81□□□□□ -2.12
YCL020WYCL020W VPS60Q03390 229 aa1.81□□□□□ -2.12
YCL020WYCL020W TVP15Q03860 143 aa1.81□□□□□ -2.12
YCL020WYCL020W NUP157P40064 1391 aaKnown RBP1.8□□□□□ -2.12
YCL020WYCL020W ZWF1P11412 505 aaKnown RBP1.8□□□□□ -2.12
YCL020WYCL020W HIS2P38635 335 aa1.8□□□□□ -2.12
YCL020WYCL020W SPL2P38839 148 aa1.8□□□□□ -2.12
YCL020WYCL020W OST3P48439 350 aa1.8□□□□□ -2.12
YCL020WYCL020W YNL050CP53952 270 aa1.8□□□□□ -2.12
YCL020WYCL020W SPO19Q03029 223 aa1.8□□□□□ -2.12
YCL020WYCL020W FCF1Q05498 189 aaPredicted RBP1.8□□□□□ -2.12
YCL020WYCL020W MRPL23Q12487 163 aaPredicted RBP1.8□□□□□ -2.12
YCL020WYCL020W ILV1P00927 576 aaKnown RBP1.79□□□□□ -2.12
YCL020WYCL020W OSM1P21375 501 aaKnown RBP1.79□□□□□ -2.12
YCL020WYCL020W ERG2P32352 222 aa1.79□□□□□ -2.12
YCL020WYCL020W SUR2P38992 349 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms