RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C SEC13Q04491 297 aaKnown RBP3.48□□□□□ -1.85
SHE3YBR130C YLR283WQ05867 314 aa3.48□□□□□ -1.85
SHE3YBR130C SEC10Q06245 871 aa3.48□□□□□ -1.85
SHE3YBR130C YOR029WQ12243 111 aa3.48□□□□□ -1.85
SHE3YBR130C SME1Q12330 94 aaPredicted RBP3.48□□□□□ -1.85
SHE3YBR130C REV1P12689 985 aa3.47□□□□□ -1.85
SHE3YBR130C DAL81P21657 970 aa3.47□□□□□ -1.85
SHE3YBR130C RNA15P25299 296 aaPredicted RBP3.47□□□□□ -1.85
SHE3YBR130C POF1P25576 258 aa3.47□□□□□ -1.85
SHE3YBR130C PEX3P28795 441 aa3.47□□□□□ -1.85
SHE3YBR130C KRE6P32486 720 aa3.47□□□□□ -1.85
SHE3YBR130C KRE29P40026 464 aa3.47□□□□□ -1.85
SHE3YBR130C RTR1P40084 226 aaPredicted RBP3.47□□□□□ -1.85
SHE3YBR130C YIL054WP40524 105 aa3.47□□□□□ -1.85
SHE3YBR130C MIC19P43594 170 aa3.47□□□□□ -1.85
SHE3YBR130C CGR1P53188 120 aa3.47□□□□□ -1.85
SHE3YBR130C TPS1Q00764 495 aaKnown RBP3.47□□□□□ -1.85
SHE3YBR130C API2Q04413 109 aa3.47□□□□□ -1.85
SHE3YBR130C SCW10Q04951 389 aa3.47□□□□□ -1.85
SHE3YBR130C ARC18Q05933 178 aaKnown RBP3.47□□□□□ -1.85
SHE3YBR130C YOR292CQ08743 309 aa3.47□□□□□ -1.85
SHE3YBR130C MSH5Q12175 901 aa3.47□□□□□ -1.85
SHE3YBR130C YBL111CQ3E7Y5 667 aa3.47□□□□□ -1.85
SHE3YBR130C YMR316C-AI2HB70 103 aa3.46□□□□□ -1.86
SHE3YBR130C YAL064W-BO13512 126 aa3.46□□□□□ -1.86
SHE3YBR130C RPS3P05750 240 aaKnown RBP3.46□□□□□ -1.86
SHE3YBR130C VPS3P23643 1011 aa3.46□□□□□ -1.86
SHE3YBR130C VPH2P32341 215 aa3.46□□□□□ -1.86
SHE3YBR130C ALK2P32789 676 aaPredicted RBP3.46□□□□□ -1.86
SHE3YBR130C TIP20P33891 701 aa3.46□□□□□ -1.86
SHE3YBR130C AIM29P36154 155 aa3.46□□□□□ -1.86
SHE3YBR130C MRP21P38175 177 aa3.46□□□□□ -1.86
SHE3YBR130C DED81P38707 554 aaKnown RBP3.46□□□□□ -1.86
SHE3YBR130C IBA57P47158 497 aa3.46□□□□□ -1.86
SHE3YBR130C TPN1P53099 579 aa3.46□□□□□ -1.86
SHE3YBR130C FMP48P53233 369 aa3.46□□□□□ -1.86
SHE3YBR130C RNY1Q02933 434 aaKnown RBP3.46□□□□□ -1.86
SHE3YBR130C VHS1Q03785 461 aa3.46□□□□□ -1.86
SHE3YBR130C UTP15Q04305 513 aaKnown RBP3.46□□□□□ -1.86
SHE3YBR130C MIM1Q08176 113 aa3.46□□□□□ -1.86
SHE3YBR130C YOR114WQ12219 294 aa3.46□□□□□ -1.86
SHE3YBR130C YOS9Q99220 542 aa3.46□□□□□ -1.86
SHE3YBR130C PSK1P31374 1356 aa3.46□□□□□ -1.86
SHE3YBR130C CFT1Q06632 1357 aaKnown RBP3.46□□□□□ -1.86
SHE3YBR130C RPL24BP24000 155 aaKnown RBP3.45□□□□□ -1.86
SHE3YBR130C MRX3P38172 270 aa3.45□□□□□ -1.86
SHE3YBR130C ALD5P40047 520 aaKnown RBP3.45□□□□□ -1.86
SHE3YBR130C YGL262WP53054 175 aa3.45□□□□□ -1.86
SHE3YBR130C LIF1P53150 421 aa3.45□□□□□ -1.86
SHE3YBR130C MRPS16Q02608 121 aa3.45□□□□□ -1.86
SHE3YBR130C VPS60Q03390 229 aa3.45□□□□□ -1.86
SHE3YBR130C YOR376WQ08900 122 aa3.45□□□□□ -1.86
SHE3YBR130C CSM4Q08955 156 aa3.45□□□□□ -1.86
SHE3YBR130C TRM10Q12400 293 aa3.45□□□□□ -1.86
SHE3YBR130C STH1P32597 1359 aa3.45□□□□□ -1.86
SHE3YBR130C TDH2P00358 332 aaKnown RBP3.44□□□□□ -1.86
SHE3YBR130C PET494P07390 489 aaPredicted RBP3.44□□□□□ -1.86
SHE3YBR130C IMP1P28627 190 aa3.44□□□□□ -1.86
SHE3YBR130C CAM1P29547 415 aaKnown RBP3.44□□□□□ -1.86
SHE3YBR130C MRPL3P36516 390 aa3.44□□□□□ -1.86
SHE3YBR130C MSS2P40990 351 aa3.44□□□□□ -1.86
SHE3YBR130C YFL064CP43540 174 aa3.44□□□□□ -1.86
SHE3YBR130C PRP24P49960 444 aaKnown RBP3.44□□□□□ -1.86
SHE3YBR130C PGA2P53903 129 aa3.44□□□□□ -1.86
SHE3YBR130C YNL040WP53960 456 aaPredicted RBP3.44□□□□□ -1.86
SHE3YBR130C INP1Q03694 420 aa3.44□□□□□ -1.86
SHE3YBR130C GRX3Q03835 250 aa3.44□□□□□ -1.86
SHE3YBR130C YPL278CQ08990 100 aa3.44□□□□□ -1.86
SHE3YBR130C PPA2P28239 310 aa3.43□□□□□ -1.86
SHE3YBR130C GPX1P36014 167 aa3.43□□□□□ -1.86
SHE3YBR130C YKT6P36015 200 aaKnown RBP3.43□□□□□ -1.86
SHE3YBR130C SEN34P39707 275 aa3.43□□□□□ -1.86
SHE3YBR130C THO1P40040 218 aaKnown RBP3.43□□□□□ -1.86
SHE3YBR130C OTU1P43558 301 aa3.43□□□□□ -1.86
SHE3YBR130C MAL13P53338 473 aa3.43□□□□□ -1.86
SHE3YBR130C HAL1Q01766 294 aa3.43□□□□□ -1.86
SHE3YBR130C MHR1Q06630 226 aa3.43□□□□□ -1.86
SHE3YBR130C YDR018CQ12185 396 aa3.43□□□□□ -1.86
SHE3YBR130C SNU23Q12368 194 aaPredicted RBP3.43□□□□□ -1.86
SHE3YBR130C HSP26P15992 214 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SHE3YBR130C DOA4P32571 926 aa3.42□□□□□ -1.86
SHE3YBR130C FRM2P37261 193 aa3.42□□□□□ -1.86
SHE3YBR130C LDB7P38210 180 aa3.42□□□□□ -1.86
SHE3YBR130C FZO1P38297 855 aa3.42□□□□□ -1.86
SHE3YBR130C RRT13P40042 185 aa3.42□□□□□ -1.86
SHE3YBR130C PRE5P40302 234 aaKnown RBP3.42□□□□□ -1.86
SHE3YBR130C ASI3P53983 676 aa3.42□□□□□ -1.86
SHE3YBR130C EBS1Q03466 884 aaKnown RBP3.42□□□□□ -1.86
SHE3YBR130C MYO5Q04439 1219 aaKnown RBP3.42□□□□□ -1.86
SHE3YBR130C GTO3Q04806 366 aa3.42□□□□□ -1.86
SHE3YBR130C YOL029CQ08187 201 aa3.42□□□□□ -1.86
SHE3YBR130C TMC1Q08422 150 aaPredicted RBP3.42□□□□□ -1.86
SHE3YBR130C CBP6P07253 162 aaPredicted RBP3.41□□□□□ -1.86
SHE3YBR130C OSM1P21375 501 aaKnown RBP3.41□□□□□ -1.86
SHE3YBR130C MRPL25P23369 157 aa3.41□□□□□ -1.86
SHE3YBR130C MRPL27P36526 146 aaPredicted RBP3.41□□□□□ -1.86
SHE3YBR130C MBA1P38300 278 aa3.41□□□□□ -1.86
SHE3YBR130C EDC2P40023 145 aaPredicted RBP3.41□□□□□ -1.86
SHE3YBR130C DSN1P40568 576 aa3.41□□□□□ -1.86
SHE3YBR130C YGL118CP53132 145 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms