RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C RNH1Q04740 348 aa5.89□□□□□ -1.47
LDB7YBL006C TAZ1Q06510 381 aa5.89□□□□□ -1.47
LDB7YBL006C RRP15Q06511 250 aaPredicted RBP5.89□□□□□ -1.47
LDB7YBL006C DTD1Q07648 150 aaKnown RBP5.89□□□□□ -1.47
LDB7YBL006C SYC1Q08553 188 aaPredicted RBP5.89□□□□□ -1.47
LDB7YBL006C CCW14O13547 238 aa5.88□□□□□ -1.47
LDB7YBL006C MSW1P04803 379 aa5.88□□□□□ -1.47
LDB7YBL006C RPS5P26783 225 aaKnown RBP5.88□□□□□ -1.47
LDB7YBL006C GLC7P32598 312 aaKnown RBP5.88□□□□□ -1.47
LDB7YBL006C YME2P32843 850 aa5.88□□□□□ -1.47
LDB7YBL006C VBA2P38358 474 aaKnown RBP5.88□□□□□ -1.47
LDB7YBL006C RRG9P40156 214 aa5.88□□□□□ -1.47
LDB7YBL006C YJL055WP47044 245 aa5.88□□□□□ -1.47
LDB7YBL006C RMD9P53140 646 aaKnown RBP5.88□□□□□ -1.47
LDB7YBL006C OST6Q03723 332 aa5.88□□□□□ -1.47
LDB7YBL006C YDR239CQ03780 787 aa5.88□□□□□ -1.47
LDB7YBL006C YOR289WQ12012 251 aaPredicted RBP5.88□□□□□ -1.47
LDB7YBL006C ACF2Q12168 779 aa5.88□□□□□ -1.47
LDB7YBL006C TY1A-BLQ12266 440 aa5.88□□□□□ -1.47
LDB7YBL006C SNF4P12904 322 aa5.87□□□□□ -1.47
LDB7YBL006C STE18P18852 110 aa5.87□□□□□ -1.47
LDB7YBL006C BOS1P25385 244 aa5.87□□□□□ -1.47
LDB7YBL006C KRR1P25586 316 aaPredicted RBP5.87□□□□□ -1.47
LDB7YBL006C RPB9P27999 122 aa5.87□□□□□ -1.47
LDB7YBL006C CDC3P32457 520 aaKnown RBP5.87□□□□□ -1.47
LDB7YBL006C FLX1P40464 311 aa5.87□□□□□ -1.47
LDB7YBL006C PGA1P53896 198 aa5.87□□□□□ -1.47
LDB7YBL006C YNL046WP53956 172 aa5.87□□□□□ -1.47
LDB7YBL006C YMR226CQ05016 267 aaKnown RBP5.87□□□□□ -1.47
LDB7YBL006C MLC2Q06580 163 aa5.87□□□□□ -1.47
LDB7YBL006C RIB3Q99258 208 aa5.87□□□□□ -1.47
LDB7YBL006C YER145C-AA0A023PYF4 145 aa5.86□□□□□ -1.47
LDB7YBL006C SCEIP03882 235 aa5.86□□□□□ -1.47
LDB7YBL006C RPL6BP05739 176 aaKnown RBP5.86□□□□□ -1.47
LDB7YBL006C RPS13P05756 151 aaKnown RBP5.86□□□□□ -1.47
LDB7YBL006C DSF1P0CX08 502 aa5.86□□□□□ -1.47
LDB7YBL006C YNR073CP0CX09 502 aa5.86□□□□□ -1.47
LDB7YBL006C FBA1P14540 359 aaKnown RBP5.86□□□□□ -1.47
LDB7YBL006C ARO3P14843 370 aaKnown RBP5.86□□□□□ -1.47
LDB7YBL006C HNM1P19807 563 aa5.86□□□□□ -1.47
LDB7YBL006C CLG1P35190 452 aa5.86□□□□□ -1.47
LDB7YBL006C SRP102P36057 244 aaPredicted RBP5.86□□□□□ -1.47
LDB7YBL006C HIS6P40545 261 aa5.86□□□□□ -1.47
LDB7YBL006C YGR016WP53209 190 aa5.86□□□□□ -1.47
LDB7YBL006C ASI3P53983 676 aa5.86□□□□□ -1.47
LDB7YBL006C AIM36Q03798 255 aa5.86□□□□□ -1.47
LDB7YBL006C GMC1Q04399 608 aa5.86□□□□□ -1.47
LDB7YBL006C YPQ2Q06328 317 aa5.86□□□□□ -1.47
LDB7YBL006C TPO3Q06451 622 aa5.86□□□□□ -1.47
LDB7YBL006C SSK1Q07084 712 aa5.86□□□□□ -1.47
LDB7YBL006C RRS1Q08746 203 aaKnown RBP5.86□□□□□ -1.47
LDB7YBL006C RRI1Q12468 440 aa5.86□□□□□ -1.47
LDB7YBL006C TPK3P05986 398 aa5.85□□□□□ -1.47
LDB7YBL006C MET3P08536 511 aa5.85□□□□□ -1.47
LDB7YBL006C YML003WP0CF16 290 aa5.85□□□□□ -1.47
LDB7YBL006C MSI1P13712 422 aa5.85□□□□□ -1.47
LDB7YBL006C PHO80P20052 293 aa5.85□□□□□ -1.47
LDB7YBL006C PHO90P39535 881 aa5.85□□□□□ -1.47
LDB7YBL006C THO1P40040 218 aaKnown RBP5.85□□□□□ -1.47
LDB7YBL006C SFH5P47008 294 aa5.85□□□□□ -1.47
LDB7YBL006C LOH1P47055 219 aa5.85□□□□□ -1.47
LDB7YBL006C NQM1P53228 333 aaPredicted RBP5.85□□□□□ -1.47
LDB7YBL006C ASI2P53895 289 aa5.85□□□□□ -1.47
LDB7YBL006C SMP3Q04174 516 aa5.85□□□□□ -1.47
LDB7YBL006C NNT1Q05874 261 aa5.85□□□□□ -1.47
LDB7YBL006C YPL225WQ08971 146 aaKnown RBP5.85□□□□□ -1.47
LDB7YBL006C FRE8Q12209 686 aa5.85□□□□□ -1.47
LDB7YBL006C COX5BP00425 151 aa5.84□□□□□ -1.47
LDB7YBL006C YAK1P14680 807 aa5.84□□□□□ -1.47
LDB7YBL006C DBF2P22204 572 aa5.84□□□□□ -1.47
LDB7YBL006C TAT1P38085 619 aa5.84□□□□□ -1.47
LDB7YBL006C YBR138CP38277 524 aa5.84□□□□□ -1.47
LDB7YBL006C OST1P41543 476 aaKnown RBP5.84□□□□□ -1.47
LDB7YBL006C ABM1P47146 123 aa5.84□□□□□ -1.47
LDB7YBL006C RSM23Q01163 450 aa5.84□□□□□ -1.47
LDB7YBL006C YPR196WQ06595 470 aa5.84□□□□□ -1.47
LDB7YBL006C YPR097WQ06839 1073 aa5.84□□□□□ -1.47
LDB7YBL006C CSI2Q08054 341 aa5.84□□□□□ -1.47
LDB7YBL006C YCL048W-AQ2V2Q2 79 aa5.84□□□□□ -1.47
LDB7YBL006C YGR161W-CQ3E744 92 aa5.84□□□□□ -1.47
LDB7YBL006C SAM35P14693 329 aa5.83□□□□□ -1.48
LDB7YBL006C MEK1P24719 497 aaPredicted RBP5.83□□□□□ -1.48
LDB7YBL006C RPC34P32910 317 aa5.83□□□□□ -1.48
LDB7YBL006C SUR1P33300 382 aa5.83□□□□□ -1.48
LDB7YBL006C FAT1P38225 669 aa5.83□□□□□ -1.48
LDB7YBL006C ECM8P38246 354 aa5.83□□□□□ -1.48
LDB7YBL006C YER188WP40103 239 aa5.83□□□□□ -1.48
LDB7YBL006C COS10P52924 374 aa5.83□□□□□ -1.48
LDB7YBL006C TYW3P53177 273 aa5.83□□□□□ -1.48
LDB7YBL006C COG5P53951 403 aa5.83□□□□□ -1.48
LDB7YBL006C BRE4Q07660 1125 aa5.83□□□□□ -1.48
LDB7YBL006C YPL119C-AQ3E751 87 aa5.83□□□□□ -1.48
LDB7YBL006C MES1P00958 751 aaKnown RBP5.82□□□□□ -1.48
LDB7YBL006C RPL39P04650 51 aa5.82□□□□□ -1.48
LDB7YBL006C PDE2P06776 526 aa5.82□□□□□ -1.48
LDB7YBL006C OAC1P32332 324 aa5.82□□□□□ -1.48
LDB7YBL006C VMA11P32842 164 aa5.82□□□□□ -1.48
LDB7YBL006C CTK2P46962 323 aa5.82□□□□□ -1.48
LDB7YBL006C FMP33P46998 180 aa5.82□□□□□ -1.48
LDB7YBL006C HOT1Q03213 719 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms