RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 DNAJC19Q96DA6 116 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 RIPOR3Q96MK2 946 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 REEP2Q9BRK0 252 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 ATP6V0A4Q9HBG4 840 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 KIAA1468Q9P260 1216 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 PPME1Q9Y570 386 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 PCDHA5Q9Y5H7 936 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 CACNA1GO43497 2377 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 ADGRA3Q8IWK6 1321 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 PTPRSQ13332 1948 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 C17orf102A2RUQ5 167 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 ZBTB42B2RXF5 422 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 HAS3O00219 553 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 BIN1O00499 593 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 LINC01565O15544 149 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 KLRC4O43908 158 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 HIP1RO75146 1068 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 SMIM10L2AP0DMW4 78 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 SMIM10L2BP0DMW5 78 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 GNAT1P11488 350 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 INSRRP14616 1297 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 IDEP14735 1019 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 ATF7P17544 494 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-228ENST00000641847 GUCY2CP25092 1073 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 GTF2F1P35269 517 aaKnown RBP eCLIP10.37□□□□□ -0.75
PHGDH-228ENST00000641847 RFC5P40937 340 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 IGBP1P78318 339 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 TBC1D8BQ0IIM8 1120 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 GIT2Q14161 759 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 BTG3Q14201 252 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-228ENST00000641847 GRIK4Q16099 956 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 ZNF484Q5JVG2 852 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 UNC13DQ70J99 1090 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 MAEAQ7L5Y9 396 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 DGLUCYQ7Z3D6 616 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 UBALD2Q8IYN6 164 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 SPATA20Q8TB22 786 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 TRAPPC12Q8WVT3 735 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 SLC7A3Q8WY07 619 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 CLP1Q92989 425 aaKnown RBP10.37□□□□□ -0.75
PHGDH-228ENST00000641847 CEP89Q96ST8 783 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 TIPINQ9BVW5 301 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 ZHX3Q9H4I2 956 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 ALG13Q9NP73 1137 aaKnown RBP10.37□□□□□ -0.75
PHGDH-228ENST00000641847 EXOC1Q9NV70 894 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 RMND1Q9NWS8 449 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 TUBE1Q9UJT0 475 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 MAN1B1Q9UKM7 699 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 ODF2LQ9ULJ1 636 aa10.37□□□□□ -0.75
PHGDH-228ENST00000641847 USP15Q9Y4E8 981 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-228ENST00000641847 FRMD3A2A2Y4 597 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 FAM13AO94988 1023 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 C22orf31O95567 290 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 NRIP1P48552 1158 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 SARSP49591 514 aaKnown RBP10.36□□□□□ -0.75
PHGDH-228ENST00000641847 ZNF200P98182 395 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-228ENST00000641847 MAPK7Q13164 816 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 KMT5BQ4FZB7 885 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 FAM102BQ5T8I3 360 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 NT5DC1Q5TFE4 455 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 SASS6Q6UVJ0 657 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 CCDC65Q8IXS2 484 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 MCPH1Q8NEM0 835 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 LMBR1Q8WVP7 490 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 P2RX5Q93086 422 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 WNT8BQ93098 351 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 CCDC47Q96A33 483 aaKnown RBP10.36□□□□□ -0.75
PHGDH-228ENST00000641847 DRC1Q96MC2 740 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 GSDMAQ96QA5 445 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 POLR3FQ9H1D9 316 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-228ENST00000641847 MFSD1Q9H3U5 465 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 DHX33Q9H6R0 707 aaKnown RBP10.36□□□□□ -0.75
PHGDH-228ENST00000641847 TLE6Q9H808 572 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 GPRC5CQ9NQ84 441 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 XPNPEP1Q9NQW7 623 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 PANK4Q9NVE7 773 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 PLAGL2Q9UPG8 496 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 COL4A6Q14031 1691 aa10.36□□□□□ -0.75
PHGDH-228ENST00000641847 MICAL3Q7RTP6 2002 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-228ENST00000641847 PVALEFA0A1B0GWK0 134 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 RRN3P2A6NIE6 340 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 MAFO75444 373 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-228ENST00000641847 CTSHP09668 335 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 GAP43P17677 238 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 TYRO3Q06418 890 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 MTMR3Q13615 1198 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 KCNB1Q14721 858 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 STX1AQ16623 288 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 ISM2Q6H9L7 571 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 FRMD5Q7Z6J6 570 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 SFR1Q86XK3 245 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 DAW1Q8N136 415 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 TRIML1Q8N9V2 468 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 MICAL1Q8TDZ2 1067 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 KIFAP3Q92845 792 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 HPS3Q969F9 1004 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 ZBTB10Q96DT7 871 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 JPH2Q9BR39 696 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-228ENST00000641847 PARVGQ9HBI0 331 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms