RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 GATMP50440 423 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 STK4Q13043 487 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 CAMK4Q16566 473 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 L1TD1Q5T7N2 865 aaKnown RBP14.49□□□□□ -0.09
GTF3A-209ENST00000640289 FAM43BQ6ZT52 329 aaPredicted RBP14.49□□□□□ -0.09
GTF3A-209ENST00000640289 ZNF598Q86UK7 904 aaKnown RBP14.49□□□□□ -0.09
GTF3A-209ENST00000640289 NPAS4Q8IUM7 802 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 SMG8Q8ND04 991 aaKnown RBP14.49□□□□□ -0.09
GTF3A-209ENST00000640289 PHOSPHO2Q8TCD6 241 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 LPPQ93052 612 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 BICD1Q96G01 975 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 ZBTB45Q96K62 511 aaPredicted RBP14.49□□□□□ -0.09
GTF3A-209ENST00000640289 TRAIPQ9BWF2 469 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 LRFN2Q9ULH4 789 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 TNFSF13BQ9Y275 285 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 HES2Q9Y543 173 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 PCDHB2Q9Y5E7 798 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 PCDHA5Q9Y5H7 936 aa14.49□□□□□ -0.09
GTF3A-209ENST00000640289 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.48□□□□□ -0.09
GTF3A-209ENST00000640289 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.48□□□□□ -0.09
GTF3A-209ENST00000640289 TISP43B9A030 160 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 ABLIM1O14639 778 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 GJB5O95377 273 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 FGFR1P11362 822 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 MYOGP15173 224 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 PBX2P40425 430 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 RAB27AP51159 221 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 SLC39A4Q6P5W5 647 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 EPM2AIP1Q7L775 607 aaPredicted RBP14.48□□□□□ -0.09
GTF3A-209ENST00000640289 ZBTB33Q86T24 672 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 ELOA2Q8IYF1 753 aaPredicted RBP14.48□□□□□ -0.09
GTF3A-209ENST00000640289 KIAA0895Q8NCT3 520 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 HVCN1Q96D96 273 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 CCDC51Q96ER9 411 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 ZBED2Q9BTP6 218 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 APOL6Q9BWW8 343 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 NXF3Q9H4D5 531 aaKnown RBP14.48□□□□□ -0.09
GTF3A-209ENST00000640289 ELAC1Q9H777 363 aaKnown RBP14.48□□□□□ -0.09
GTF3A-209ENST00000640289 PTPRHQ9HD43 1115 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 RNF19AQ9NV58 838 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 TMEM161AQ9NX61 479 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 ANKFY1Q9P2R3 1169 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 IPPQ9Y573 584 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 PCDHB7Q9Y5E2 793 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 PCDHB13Q9Y5F0 798 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 MICAL3Q7RTP6 2002 aa14.48□□□□□ -0.09
GTF3A-209ENST00000640289 ANKRD63C9JTQ0 380 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 SOX1O00570 391 aaPredicted RBP14.47□□□□□ -0.09
GTF3A-209ENST00000640289 HNRNPDLO14979 420 aaKnown RBP14.47□□□□□ -0.09
GTF3A-209ENST00000640289 TOM1L1O75674 476 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 RHOBTB3O94955 611 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 PIGRP01833 764 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 STAG3L1P0CL83 205 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 HARSP12081 509 aaKnown RBP14.47□□□□□ -0.09
GTF3A-209ENST00000640289 SCP2P22307 547 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 PROZP22891 400 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 HOXD13P35453 343 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 LIG4P49917 911 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 KCNB1Q14721 858 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 LRIT3Q3SXY7 679 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 ZNF568Q3ZCX4 644 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 ZPBP2Q6X784 338 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 MRPL10Q7Z7H8 261 aaKnown RBP14.47□□□□□ -0.09
GTF3A-209ENST00000640289 NELFCDQ8IXH7 590 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 CEP120Q8N960 986 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 SPATA20Q8TB22 786 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 SCFD1Q8WVM8 642 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 SMARCE1Q969G3 411 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 ACCSQ96QU6 501 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 ADPGKQ9BRR6 497 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 TCHPQ9BT92 498 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 PBX4Q9BYU1 374 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 TRIM6Q9C030 488 aaPredicted RBP14.47□□□□□ -0.09
GTF3A-209ENST00000640289 HAPLN2Q9GZV7 340 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 CDT1Q9H211 546 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 HOOK1Q9UJC3 728 aaKnown RBP14.47□□□□□ -0.09
GTF3A-209ENST00000640289 GDAQ9Y2T3 454 aa14.47□□□□□ -0.09
GTF3A-209ENST00000640289 YBX2Q9Y2T7 364 aaKnown RBP14.47□□□□□ -0.09
GTF3A-209ENST00000640289 LCHNA4D1U4 455 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 EIF3DO15371 548 aaKnown RBP eCLIP14.46□□□□□ -0.09
GTF3A-209ENST00000640289 TLL1O43897 1013 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 ZNF623O75123 536 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 DGKIO75912 1065 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 SMC2O95347 1197 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 EOMESO95936 686 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 SKIP12755 728 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 AKAP5P24588 427 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 ABCD1P33897 745 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 HTRA4P83105 476 aaPredicted RBP14.46□□□□□ -0.09
GTF3A-209ENST00000640289 PSMD2Q13200 908 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 ALCAMQ13740 583 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 SEZ6Q53EL9 994 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 CLLU1OSQ5K130 101 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 ISM2Q6H9L7 571 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 MPZL3Q6UWV2 235 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 AGMOQ6ZNB7 445 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 STXBP4Q6ZWJ1 553 aa14.46□□□□□ -0.09
GTF3A-209ENST00000640289 SMYD4Q8IYR2 804 aaPredicted RBP14.46□□□□□ -0.09
GTF3A-209ENST00000640289 ZNF507Q8TCN5 953 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms