RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 GAD1Q99259 594 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 POLR3CQ9BUI4 534 aaPredicted RBP22.29■■□□□ 1.16
CLN6-222ENST00000637667 RNF39Q9H2S5 420 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 ADAM7Q9H2U9 754 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 GPRC5CQ9NQ84 441 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 STK39Q9UEW8 545 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 DBR1Q9UK59 544 aaKnown RBP22.29■■□□□ 1.16
CLN6-222ENST00000637667 FAN1Q9Y2M0 1017 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 HES2Q9Y543 173 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 ARL5CA6NH57 179 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 ITIH3Q06033 890 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 PTPN14Q15678 1187 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 C8orf34Q49A92 452 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 TTC38Q5R3I4 469 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 MAEAQ7L5Y9 396 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 FAM184AQ8NB25 1140 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 MCPH1Q8NEM0 835 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 ERMNQ8TAM6 284 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 DZANK1Q9NVP4 752 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 CDH22Q9UJ99 828 aa22.28■■□□□ 1.16
CLN6-222ENST00000637667 LRRIQ4A6NIV6 560 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 NRP1O14786 923 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 B4GALT5O43286 388 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 RPA1P27694 616 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 HOXD11P31277 338 aaPredicted RBP22.27■■□□□ 1.16
CLN6-222ENST00000637667 MLH1P40692 756 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 TRAPPC10P48553 1259 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 ZXDAP98168 799 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 GNL2Q13823 731 aaKnown RBP22.27■■□□□ 1.16
CLN6-222ENST00000637667 POTEGQ6S5H5 508 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 NOSTRINQ8IVI9 506 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 COLGALT2Q8IYK4 626 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 HACE1Q8IYU2 909 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 SLC22A17Q8WUG5 538 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 NECTIN4Q96NY8 510 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 APOL6Q9BWW8 343 aa22.27■■□□□ 1.16
CLN6-222ENST00000637667 TRIM6Q9C030 488 aaPredicted RBP22.27■■□□□ 1.16
CLN6-222ENST00000637667 PRG3Q9Y2Y8 225 aaPredicted RBP22.27■■□□□ 1.16
CLN6-222ENST00000637667 EPCAMP16422 314 aa22.26■■□□□ 1.15
CLN6-222ENST00000637667 RARS2Q5T160 578 aaKnown RBP22.26■■□□□ 1.15
CLN6-222ENST00000637667 TRIM67Q6ZTA4 783 aa22.26■■□□□ 1.15
CLN6-222ENST00000637667 PPFIBP1Q86W92 1011 aa22.26■■□□□ 1.15
CLN6-222ENST00000637667 C12orf76Q8N812 135 aaPredicted RBP22.26■■□□□ 1.15
CLN6-222ENST00000637667 ZFP42Q96MM3 310 aa22.26■■□□□ 1.15
CLN6-222ENST00000637667 NXF3Q9H4D5 531 aaKnown RBP22.26■■□□□ 1.15
CLN6-222ENST00000637667 GIT1Q9Y2X7 761 aa22.26■■□□□ 1.15
CLN6-222ENST00000637667 ZNF318Q5VUA4 2279 aa22.26■■□□□ 1.15
CLN6-222ENST00000637667 A0A1B0GUA9 196 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 SSBP05455 408 aaKnown RBP eCLIP22.25■■□□□ 1.15
CLN6-222ENST00000637667 SP100P23497 879 aaPredicted RBP22.25■■□□□ 1.15
CLN6-222ENST00000637667 MTHFRP42898 656 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 SCNN1GP51170 649 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 DSC1Q08554 894 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 CDCA2Q69YH5 1023 aaPredicted RBP22.25■■□□□ 1.15
CLN6-222ENST00000637667 SLC27A1Q6PCB7 646 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 PPP4R3CPQ6ZMV5 832 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 CDR2LQ86X02 465 aaPredicted RBP22.25■■□□□ 1.15
CLN6-222ENST00000637667 MFSD14AQ96MC6 490 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 RIPOR3Q96MK2 946 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 EMILIN2Q9BXX0 1053 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 POMKQ9H5K3 350 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 MARCH5Q9NX47 278 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 MIOSQ9NXC5 875 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 NOL7Q9UMY1 257 aaKnown RBP22.25■■□□□ 1.15
CLN6-222ENST00000637667 NR2E1Q9Y466 385 aa22.25■■□□□ 1.15
CLN6-222ENST00000637667 ARHGEF35A5YM69 484 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 TMEM221A6NGB7 291 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 M0R296 226 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 LILRB3O75022 631 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 NPTXRO95502 500 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 CYP11B2P19099 503 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 OR1G1P47890 313 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 HAUS3Q68CZ6 603 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 PADI6Q6TGC4 694 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 CABP7Q86V35 215 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 ZBTB8OSQ8IWT0 167 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 KLHL5Q96PQ7 755 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 HERC2P3Q9BVR0 1158 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 TSHZ2Q9NRE2 1034 aa22.24■■□□□ 1.15
CLN6-222ENST00000637667 MRPL17Q9NRX2 175 aaKnown RBP22.24■■□□□ 1.15
CLN6-222ENST00000637667 PRMT7Q9NVM4 692 aaPredicted RBP22.24■■□□□ 1.15
CLN6-222ENST00000637667 SOD2P04179 222 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 URODP06132 367 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 CNPP09543 421 aaKnown RBP22.23■■□□□ 1.15
CLN6-222ENST00000637667 WEE2P0C1S8 567 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 MUTP22033 750 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 AKAP5P24588 427 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 KLRC2P26717 231 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 FXR2P51116 673 aaKnown RBP eCLIP22.23■■□□□ 1.15
CLN6-222ENST00000637667 NBR1Q14596 966 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 PTPN21Q16825 1174 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 KANK3Q6NY19 840 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 BMP8AQ7Z5Y6 402 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 C4orf32Q8N8J7 132 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 BSNDQ8WZ55 320 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 PRIMPOLQ96LW4 560 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 FZD8Q9H461 694 aa22.23■■□□□ 1.15
CLN6-222ENST00000637667 NR1I2O75469 434 aa22.22■■□□□ 1.15
CLN6-222ENST00000637667 U2AF2P26368 475 aaKnown RBP eCLIP22.22■■□□□ 1.15
CLN6-222ENST00000637667 CCT6AP40227 531 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms