RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 TMEM117Q9H0C3 514 aa17.31■□□□□ 0.36
CHRNA7-221ENST00000636898 TMOD4Q9NZQ9 345 aa17.31■□□□□ 0.36
CHRNA7-221ENST00000636898 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.31■□□□□ 0.36
CHRNA7-221ENST00000636898 E7EVH7 732 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 KIAA0391O15091 583 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 TRAPPC3O43617 180 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 CHRNB2P17787 502 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 LIG3P49916 1009 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 PEX5P50542 639 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 MRPS9P82933 396 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 SHC3Q92529 594 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 GLG1Q92896 1179 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 CD101Q93033 1021 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 TLCD1Q96CP7 247 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 HVCN1Q96D96 273 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 RUNDC3BQ96NL0 473 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 TRIM31Q9BZY9 425 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 PABPC3Q9H361 631 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 CNOT10Q9H9A5 744 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 VEZTQ9HBM0 779 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 PKD2L1Q9P0L9 805 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 PARP2Q9UGN5 583 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 EXOC7Q9UPT5 735 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 ATP8A1Q9Y2Q0 1164 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 ASTN2O75129 1339 aaPredicted RBP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 GMNCA6NCL1 334 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 WDR46O15213 610 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 PTGIRP43119 386 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 MFAP3P55082 362 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 IFFO1Q0D2I5 559 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 MIGA2Q7L4E1 593 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 OTUD6BQ8N6M0 293 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 PRELID2Q8N945 189 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 LPAR1Q92633 364 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 KRT35Q92764 455 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 PCDHB18PQ96TA0 734 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 PSMD1Q99460 953 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 BCCIPQ9P287 314 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 NOVA2Q9UNW9 492 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 COQ4Q9Y3A0 265 aa17.3■□□□□ 0.36
CHRNA7-221ENST00000636898 TULP1O00294 542 aaPredicted RBP17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 C21orf2O43822 256 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 RAD17O75943 681 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 CDR1P51861 262 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 RASA3Q14644 834 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 CYP1B1Q16678 543 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 SEL1L2Q5TEA6 688 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 ARMC9Q7Z3E5 817 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 ADAT2Q7Z6V5 191 aaKnown RBP17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 NOP9Q86U38 636 aaKnown RBP17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 CDAN1Q8IWY9 1227 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 PPANQ9NQ55 473 aaKnown RBP17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 ANKEF1Q9NU02 776 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 PGAP2Q9UHJ9 254 aa17.29■□□□□ 0.36
CHRNA7-221ENST00000636898 FSBPO95073 299 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 SGPL1O95470 568 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 CYP1A2P05177 515 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 COMTP21964 271 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 SFNP31947 248 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 COPB2P35606 906 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 JAK3P52333 1124 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 PEX3P56589 373 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 MAGOHP61326 146 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 PSMC5P62195 406 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 SPP2Q13103 211 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 BYSLQ13895 437 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 SNRNP35Q16560 246 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 KRT39Q6A163 491 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 ZDHHC24Q6UX98 284 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 CROCCP2Q86T23 111 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 RTKN2Q8IZC4 609 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 SYTL5Q8TDW5 730 aaPredicted RBP17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 MAGOHBQ96A72 148 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 CYFIP2Q96F07 1278 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 KREMEN1Q96MU8 473 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 ZNF341Q9BYN7 854 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 FAM129AQ9BZQ8 928 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 EPB41L4BQ9H329 900 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 UVRAGQ9P2Y5 699 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 RGPD3A6NKT7 1758 aaPredicted RBP17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 RGPD4Q7Z3J3 1758 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 BACH1O14867 736 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 SLC16A4O15374 487 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 ADRB2P07550 413 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 USP8P40818 1118 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 GPC3P51654 580 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 PMS2P54278 862 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 ZNF746Q6NUN9 644 aaPredicted RBP17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 KAT5Q92993 513 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 C18orf8Q96DM3 657 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 GRHL1Q9NZI5 618 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 CNOT7Q9UIV1 285 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 GTF3C4Q9UKN8 822 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 TRPC6Q9Y210 931 aa17.28■□□□□ 0.36
CHRNA7-221ENST00000636898 WDR64B1ANS9 1081 aa17.27■□□□□ 0.36
CHRNA7-221ENST00000636898 ALAS1P13196 640 aa17.27■□□□□ 0.36
CHRNA7-221ENST00000636898 MARCKSL1P49006 195 aa17.27■□□□□ 0.36
CHRNA7-221ENST00000636898 SMTNP53814 917 aa17.27■□□□□ 0.36
CHRNA7-221ENST00000636898 PLTPP55058 493 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms