RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 STARD6P59095 220 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 CREMQ03060 361 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 WWC2Q6AWC2 1192 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 TYW1BQ6NUM6 668 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 EFCAB12Q6NXP0 572 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 PLA2G4DQ86XP0 818 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 SLC44A3Q8N4M1 653 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 SUMF1Q8NBK3 374 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 RDM1Q8NG50 284 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 URGCPQ8TCY9 931 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 GPT2Q8TD30 523 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 HELQQ8TDG4 1101 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 CRYGNQ8WXF5 182 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 SPATA32Q96LK8 384 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 ZNF396Q96N95 335 aaPredicted RBP8.26□□□□□ -1.09
CIITA-214ENST00000636238 KLHL5Q96PQ7 755 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 USP28Q96RU2 1077 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 HINFPQ9BQA5 517 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 JPH2Q9BR39 696 aaPredicted RBP8.26□□□□□ -1.09
CIITA-214ENST00000636238 RTKNQ9BST9 563 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 FAM126AQ9BYI3 521 aaPredicted RBP8.26□□□□□ -1.09
CIITA-214ENST00000636238 GZF1Q9H116 711 aaPredicted RBP8.26□□□□□ -1.09
CIITA-214ENST00000636238 RXFP1Q9HBX9 757 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 UBN1Q9NPG3 1134 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 ARHGEF3Q9NR81 526 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.26□□□□□ -1.09
CIITA-214ENST00000636238 TBC1D13Q9NVG8 400 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 ZDHHC7Q9NXF8 308 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 CDH22Q9UJ99 828 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 CLIC4Q9Y696 253 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 CLUHO75153 1309 aa8.26□□□□□ -1.09
CIITA-214ENST00000636238 DMXL1Q9Y485 3027 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 KIAA1671Q9BY89 1806 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 DNAH14Q0VDD8 3507 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 IGLV3-22A0A075B6J6 115 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 ESYT2A0FGR8 921 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 KRBA1A5PL33 1030 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 ANHXE9PGG2 379 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 STK25O00506 426 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 TBC1D4O60343 1298 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 GLUD1P00367 558 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 SOD2P04179 222 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 OATP04181 439 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 URODP06132 367 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 CNPP09543 421 aaKnown RBP8.25□□□□□ -1.09
CIITA-214ENST00000636238 WEE2P0C1S8 567 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 ATP2B1P20020 1258 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 PTMSP20962 102 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 U2AF2P26368 475 aaKnown RBP eCLIP8.25□□□□□ -1.09
CIITA-214ENST00000636238 CA8P35219 290 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 KRT2P35908 639 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 DNM2P50570 870 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 NAPAP54920 295 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 PRKCQQ04759 706 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 RNASELQ05823 741 aaKnown RBP8.25□□□□□ -1.09
CIITA-214ENST00000636238 PCBP1Q15365 356 aaKnown RBP eCLIP8.25□□□□□ -1.09
CIITA-214ENST00000636238 NPY5RQ15761 445 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 EARS2Q5JPH6 523 aaKnown RBP8.25□□□□□ -1.09
CIITA-214ENST00000636238 BRAPQ7Z569 592 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 EXOC8Q8IYI6 725 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 RNF169Q8NCN4 708 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 CNNM3Q8NE01 707 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 CCDC12Q8WUD4 166 aaPredicted RBP8.25□□□□□ -1.09
CIITA-214ENST00000636238 LEO1Q8WVC0 666 aaPredicted RBP8.25□□□□□ -1.09
CIITA-214ENST00000636238 SCLT1Q96NL6 688 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 RPS6KC1Q96S38 1066 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 NELL2Q99435 816 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 RIT2Q99578 217 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 ZNF577Q9BSK1 485 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 IER2Q9BTL4 223 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 HERC2P3Q9BVR0 1158 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 NRDE2Q9H7Z3 1164 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 BARHL2Q9NY43 387 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 PPME1Q9Y570 386 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 CHD6Q8TD26 2715 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 PLXNA4Q9HCM2 1894 aa8.25□□□□□ -1.09
CIITA-214ENST00000636238 ZMYM2Q9UBW7 1377 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 IGKV6-21A0A0C4DH24 114 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 FAM86B1E9PN63 330 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 INPPL1O15357 1258 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 OFD1O75665 1012 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 ALDH2P05091 517 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 POU2F2P09086 479 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 FAM86B2P0C5J1 330 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 GBP2P32456 591 aaPredicted RBP8.24□□□□□ -1.09
CIITA-214ENST00000636238 CIITAP33076 1130 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 TOB1P50616 345 aaPredicted RBP8.24□□□□□ -1.09
CIITA-214ENST00000636238 CLCN3P51790 818 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 JAK3P52333 1124 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 PFKPQ01813 784 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 STK38Q15208 465 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 RSPO4Q2I0M5 234 aaPredicted RBP8.24□□□□□ -1.09
CIITA-214ENST00000636238 SKOR2Q2VWA4 1001 aaPredicted RBP8.24□□□□□ -1.09
CIITA-214ENST00000636238 VARS2Q5ST30 1063 aaKnown RBP8.24□□□□□ -1.09
CIITA-214ENST00000636238 TWF2Q6IBS0 349 aaKnown RBP8.24□□□□□ -1.09
CIITA-214ENST00000636238 DCLRE1AQ6PJP8 1040 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 MAMSTRQ6ZN01 415 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 RTL10Q7L3V2 364 aa8.24□□□□□ -1.09
CIITA-214ENST00000636238 MRPL10Q7Z7H8 261 aaKnown RBP8.24□□□□□ -1.09
CIITA-214ENST00000636238 TMEM173Q86WV6 379 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms