RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 EPN2O95208 641 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 MLYCDO95822 493 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 TSHRP16473 764 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 YY1P25490 414 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 HSD17B2P37059 387 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SMTNP53814 917 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CACNB3P54284 484 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 BEX3Q00994 111 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 RELQ04864 619 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 BFSP1Q12934 665 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PRPF4BQ13523 1007 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SYCP1Q15431 976 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SMAD2Q15796 467 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 TSTQ16762 297 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PFKFB4Q16877 469 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 KBTBD12Q3ZCT8 623 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ZACNQ401N2 412 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PEAR1Q5VY43 1037 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ABHD17CQ6PCB6 329 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 IYDQ6PHW0 289 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 INTS8Q75QN2 995 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 VSIG10LQ86VR7 867 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 DENND1CQ8IV53 801 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 Q8NFD4 153 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 TNIP2Q8NFZ5 429 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 OR10H5Q8NGA6 315 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SH3RF3Q8TEJ3 882 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 BSNDQ8WZ55 320 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 GIMAP5Q96F15 307 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 NECAB3Q96P71 396 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CAPS2Q9BXY5 557 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 MIR1-1HGQ9H1L0 117 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PDCL3Q9H2J4 239 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ELP3Q9H9T3 547 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 INCENPQ9NQS7 918 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 KRT84Q9NSB2 600 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 KIF17Q9P2E2 1029 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 RPS6KA6Q9UK32 745 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 KIF3AQ9Y496 699 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ATP23Q9Y6H3 246 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CEP170BQ9Y4F5 1589 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SENP3-EIF4A1A0A087X0R7 540 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 A0A1W2PPL8 197 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 RGSL1A5PLK6 1076 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CCDC169A6NNP5 214 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PRODHO43272 600 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SIN3BO75182 1162 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ATP5BP06576 529 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 HSPA1AP0DMV8 641 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 HSPA1BP0DMV9 641 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 NR2F1P10589 423 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 LAG3P18627 525 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ACSL1P33121 698 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 RNASE9P60153 205 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ZNF543Q08ER8 600 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 TRDNQ13061 729 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PMS2P11Q13670 270 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ACVR2BQ13705 512 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SART3Q15020 963 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CNN3Q15417 329 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SV2CQ496J9 727 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 C4orf48Q5BLP8 95 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 RASIP1Q5U651 963 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 TMEM132EQ6IEE7 984 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 DCLRE1AQ6PJP8 1040 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 NSMFQ6X4W1 530 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 DTHD1Q6ZMT9 781 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PRPF39Q86UA1 669 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 RPAP2Q8IXW5 612 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 TMEM57Q8N5G2 664 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 LINC00469Q8N7U9 141 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PCSK9Q8NBP7 692 aaKnown RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 NEDD1Q8NHV4 660 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 RNF139Q8WU17 664 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CHTF18Q8WVB6 975 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SEPT1Q8WYJ6 367 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 LRTOMTQ8WZ04 291 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 JADE3Q92613 823 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 KRT35Q92764 455 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 EXOC4Q96A65 974 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CNPPD1Q9BV87 410 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CRLF2Q9HC73 371 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ADPRHL2Q9NX46 363 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 DONSONQ9NYP3 566 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 TBC1D7Q9P0N9 293 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 TBC1D14Q9P2M4 693 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SIK3Q9Y2K2 1263 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 CAB39Q9Y376 341 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PCDHB12Q9Y5F1 795 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SNX8Q9Y5X2 465 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 KRT87PA6NCN2 255 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ZSCAN5CA6NGD5 496 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 CBX4O00257 560 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 DDX3XO00571 662 aaKnown RBP eCLIP5.31□□□□□ -1.566e-20■□□□□ 10.5
SDCBP-213ENST00000630925 ASAP2O43150 1006 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 MTSS1O43312 755 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 PRPSAP2O60256 369 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ZNF254O75437 659 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms