RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ANO5Q75V66 913 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZBTB10Q96DT7 871 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 MBOAT7Q96N66 472 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 ABHD10Q9NUJ1 306 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 DBR1Q9UK59 544 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 REXO2Q9Y3B8 237 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 FHOD1Q9Y613 1164 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 ABCD1P33897 745 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 P2RX5Q93086 422 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 C7orf25Q9BPX7 421 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 TTYH3Q9C0H2 523 aa13.55□□□□□ -0.24
SYNGAP1-207ENST00000628646 KCNJ18B7U540 433 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 DHX15O43143 795 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZNF862O60290 1169 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 GHRP10912 638 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 NAP1L1P55209 391 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 CCL23P55773 120 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 KCNJ12Q14500 433 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 CCDC62Q6P9F0 684 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 ARMCX3Q9UH62 379 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 CLCN6P51797 869 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 KRT83P78385 493 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 PAK2Q13177 524 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 BLOC1S4Q9NUP1 217 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 MOXD2PA6NHM9 499 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 TMEM191BP0C7N4 346 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 LAMTOR4Q0VGL1 99 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 DPH6Q7L8W6 267 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 PRDM10Q9NQV6 1147 aa13.54□□□□□ -0.24
SYNGAP1-207ENST00000628646 GJB1P08034 283 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 CTGFP29279 349 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZNF200P98182 395 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 ECM1Q16610 540 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 MYO9BQ13459 2157 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 TREHO43280 583 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 FGFR4P22455 802 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 EEF1GP26641 437 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 TFAMQ00059 246 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 STK4Q13043 487 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 TMEM119Q4V9L6 283 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 COBLL1Q53SF7 1204 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 SLFN12LQ6IEE8 588 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 CARD6Q9BX69 1037 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 TAB2Q9NYJ8 693 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 MYBP10242 640 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 NPTX2P47972 431 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 DMTNQ08495 405 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 GIT2Q14161 759 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 WDR59Q6PJI9 974 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 ACBD3Q9H3P7 528 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 EFCAB8A8MWE9 144 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 IQCEQ6IPM2 695 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 SAAL1Q96ER3 474 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 SPAG5Q96R06 1193 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 EPC1Q9H2F5 836 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 Q9Y3F1 56 aa13.53□□□□□ -0.24
SYNGAP1-207ENST00000628646 ASTN1O14525 1302 aa13.52□□□□□ -0.24
SYNGAP1-207ENST00000628646 A6NJR5 290 aa13.52□□□□□ -0.24
SYNGAP1-207ENST00000628646 CCNE1P24864 410 aa13.52□□□□□ -0.24
SYNGAP1-207ENST00000628646 GJA9P57773 515 aa13.52□□□□□ -0.24
SYNGAP1-207ENST00000628646 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.24
SYNGAP1-207ENST00000628646 FAM213AQ9BRX8 229 aa13.52□□□□□ -0.24
SYNGAP1-207ENST00000628646 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.24
SYNGAP1-207ENST00000628646 SMCHD1A6NHR9 2005 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 IGSF9BQ9UPX0 1349 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 MYADML2A6NDP7 307 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 DNAI2Q9GZS0 605 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 PRMT7Q9NVM4 692 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 TELO2Q9Y4R8 837 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 NUB1Q9Y5A7 615 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 TRPM7Q96QT4 1865 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 WDR44Q5JSH3 913 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 MTHFD1LQ6UB35 978 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 KIAA0895Q8NCT3 520 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 CAGE1Q8TC20 777 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 UBXN6Q9BZV1 441 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 TRMT13Q9NUP7 481 aaKnown RBP13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 NR2E3Q9Y5X4 410 aa13.52□□□□□ -0.25
SYNGAP1-207ENST00000628646 CEP290O15078 2479 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 EVI5O60447 810 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 TNNC2P02585 160 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 GHRHRQ02643 423 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 EHHADHQ08426 723 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 MIIPQ5JXC2 388 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 ACRBPQ8NEB7 543 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 DNAJC7Q99615 494 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 USP20Q9Y2K6 914 aa13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
SYNGAP1-207ENST00000628646 ATAD5Q96QE3 1844 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms