RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 MIF4GDA9UHW6 222 aaKnown RBP16.39■□□□□ 0.21
LINC00552-201ENST00000625151 RASSF9O75901 435 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 DRG2P55039 364 aaKnown RBP16.39■□□□□ 0.21
LINC00552-201ENST00000625151 SLC29A2Q14542 456 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 EPC2Q52LR7 807 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 ANKRD20A8PQ5CZ79 823 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 C1orf220Q5T0J3 134 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 CPLX4Q7Z7G2 160 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 CPNE8Q86YQ8 564 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 UBL4BQ8N7F7 174 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 TTLL6Q8N841 843 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 PCDHB18PQ96TA0 734 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 CBWD1Q9BRT8 395 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 TEKT3Q9BXF9 490 aa16.39■□□□□ 0.21
LINC00552-201ENST00000625151 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC00552-201ENST00000625151 PPP1R1BQ9UD71 204 aaPredicted RBP16.39■□□□□ 0.21
LINC00552-201ENST00000625151 TLDC2A0PJX2 215 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 SMIM23A6NLE4 172 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 COMTP21964 271 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 CTNNA2P26232 953 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 CHRNA3P32297 505 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PEX5P50542 639 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 VAMP7P51809 220 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 FKBP1AP62942 108 aaKnown RBP16.38■□□□□ 0.21
LINC00552-201ENST00000625151 GPC5P78333 572 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 MESDQ14696 234 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 GKAP1Q5VSY0 366 aaPredicted RBP16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PADI6Q6TGC4 694 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 INTS8Q75QN2 995 aaKnown RBP16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PLEKHO2Q8TD55 490 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 FAM129AQ9BZQ8 928 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 MTFR1LQ9H019 292 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 ADAM7Q9H2U9 754 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 SEMA4AQ9H3S1 761 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 SLC40A1Q9NP59 571 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PCDHA3Q9Y5H8 950 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PFASO15067 1338 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 TCRBV7S2A1N4TA0A589 114 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 IPO5O00410 1097 aaKnown RBP16.38■□□□□ 0.21
LINC00552-201ENST00000625151 CTNND1O60716 968 aaKnown RBP16.38■□□□□ 0.21
LINC00552-201ENST00000625151 SGPL1O95470 568 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 CHN1P15882 459 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 CLUL1Q15846 466 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
LINC00552-201ENST00000625151 ARMC9Q7Z3E5 817 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 CHMP6Q96FZ7 201 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PGM2Q96G03 612 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
LINC00552-201ENST00000625151 CCDC114Q96M63 670 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 AZI2Q9H6S1 392 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 ACTR5Q9H9F9 607 aaPredicted RBP16.38■□□□□ 0.21
LINC00552-201ENST00000625151 ACP6Q9NPH0 428 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 PCYOX1Q9UHG3 505 aa16.38■□□□□ 0.21
LINC00552-201ENST00000625151 IFI35P80217 286 aaPredicted RBP16.37■□□□□ 0.21
LINC00552-201ENST00000625151 TCEAL1Q15170 157 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 CCDC137Q6PK04 289 aaKnown RBP16.37■□□□□ 0.21
LINC00552-201ENST00000625151 UHMK1Q8TAS1 419 aaKnown RBP16.37■□□□□ 0.21
LINC00552-201ENST00000625151 CENPTQ96BT3 561 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 SELENOSQ9BQE4 189 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 SGIP1Q9BQI5 828 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 RANBP17Q9H2T7 1088 aaKnown RBP16.37■□□□□ 0.21
LINC00552-201ENST00000625151 KLC4Q9NSK0 619 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 ANKRD63C9JTQ0 380 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 ENTPD3O75355 529 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 PYGMP11217 842 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 CHRNB2P17787 502 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 MMP13P45452 471 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 NOP9Q86U38 636 aaKnown RBP16.37■□□□□ 0.21
LINC00552-201ENST00000625151 BTBD6Q96KE9 485 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00552-201ENST00000625151 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
LINC00552-201ENST00000625151 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.37■□□□□ 0.21
LINC00552-201ENST00000625151 RTN2O75298 545 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 MMEP08473 750 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 HSPA6P17066 643 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 FGFR4P22455 802 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 SETQ01105 290 aaPredicted RBP16.36■□□□□ 0.21
LINC00552-201ENST00000625151 EPS8L1Q8TE68 723 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 ATXN2LQ8WWM7 1075 aaKnown RBP16.36■□□□□ 0.21
LINC00552-201ENST00000625151 ZNF317Q96PQ6 595 aaPredicted RBP16.36■□□□□ 0.21
LINC00552-201ENST00000625151 RPS6KC1Q96S38 1066 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 NOCTQ9UK39 431 aaKnown RBP16.36■□□□□ 0.21
LINC00552-201ENST00000625151 TMX2Q9Y320 296 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 CCDC169A6NNP5 214 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 ATP2C2O75185 946 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 ALAS1P13196 640 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 CDR1P51861 262 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 CETN1Q12798 172 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 TRAF1Q13077 416 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 SEL1L2Q5TEA6 688 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 EPS8L3Q8TE67 593 aaKnown RBP16.36■□□□□ 0.21
LINC00552-201ENST00000625151 CD101Q93033 1021 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 CD248Q9HCU0 757 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
LINC00552-201ENST00000625151 RGS16O15492 202 aaPredicted RBP16.35■□□□□ 0.21
LINC00552-201ENST00000625151 ITGB5P18084 799 aa16.35■□□□□ 0.21
LINC00552-201ENST00000625151 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
LINC00552-201ENST00000625151 CCT6BQ92526 530 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms