RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CLDN10P78369 228 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 ARID5AQ03989 594 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 POU5F1BQ06416 359 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 KIF22Q14807 665 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 SURF1Q15526 300 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 KIAA0753Q2KHM9 967 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 ZNF484Q5JVG2 852 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 ALKBH5Q6P6C2 394 aaKnown RBP17.72■□□□□ 0.43
LDB3-208ENST00000623007 RSRC2Q7L4I2 434 aaKnown RBP17.72■□□□□ 0.43
LDB3-208ENST00000623007 FBXL13Q8NEE6 735 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 LMO3Q8TAP4 145 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 EFCC1Q9HA90 598 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 NAGPAQ9UK23 515 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 PLXNB2O15031 1838 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 ZNF236Q9UL36 1845 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 A0A087X0T9 212 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 A0A0U1RQJ8 604 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 ANKRD63C9JTQ0 380 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 MAGEB2O15479 319 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 EVI5O60447 810 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 FAM228BP0C875 321 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 ADORA2AP29274 412 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 ITIH3Q06033 890 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 GRM1Q13255 1194 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 PSMD6Q15008 389 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 EEPD1Q7L9B9 569 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 ANKRD13CQ8N6S4 541 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 ZNF526Q8TF50 670 aaPredicted RBP17.71■□□□□ 0.43
LDB3-208ENST00000623007 ATRIPQ8WXE1 791 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 FNBP1Q96RU3 617 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 TMEM117Q9H0C3 514 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 IKZF4Q9H2S9 585 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 PLXNA1Q9UIW2 1896 aa17.71■□□□□ 0.43
LDB3-208ENST00000623007 RCCD1A6NED2 376 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 CELF2O95319 508 aaKnown RBP17.71■□□□□ 0.42
LDB3-208ENST00000623007 H2AFZP0C0S5 128 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 PPP3CAQ08209 521 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 ELF2Q15723 593 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 ERCC6LQ2NKX8 1250 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 CDCA2Q69YH5 1023 aaPredicted RBP17.71■□□□□ 0.42
LDB3-208ENST00000623007 CCDC70Q6NSX1 233 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 H2AFVQ71UI9 128 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 ZNF571Q7Z3V5 609 aaPredicted RBP17.71■□□□□ 0.42
LDB3-208ENST00000623007 CBWD2Q8IUF1 395 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 FBXO16Q8IX29 292 aaPredicted RBP17.71■□□□□ 0.42
LDB3-208ENST00000623007 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 PPTC7Q8NI37 304 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 BRI3BPQ8WY22 251 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 DHX38Q92620 1227 aaKnown RBP17.71■□□□□ 0.42
LDB3-208ENST00000623007 TMEM143Q96AN5 459 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 NT5C1BQ96P26 610 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 MRPL4Q9BYD3 311 aaKnown RBP17.71■□□□□ 0.42
LDB3-208ENST00000623007 NFKBIZQ9BYH8 718 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 TRIM10Q9UDY6 481 aa17.71■□□□□ 0.42
LDB3-208ENST00000623007 AGO2Q9UKV8 859 aaKnown RBP17.71■□□□□ 0.42
LDB3-208ENST00000623007 ADGRA3Q8IWK6 1321 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 MANSC4A6NHS7 340 aaPredicted RBP17.7■□□□□ 0.42
LDB3-208ENST00000623007 SLC15A5A6NIM6 579 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 PEX10O60683 326 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 GCLMP48507 274 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 NAP1L1P55209 391 aaKnown RBP17.7■□□□□ 0.42
LDB3-208ENST00000623007 GRB14Q14449 540 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 HSDL1Q3SXM5 330 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 SLC39A4Q6P5W5 647 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 DPP9Q86TI2 863 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 ZNF710Q8N1W2 664 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 ASAP3Q8TDY4 903 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 KIFC3Q9BVG8 833 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 SNX12Q9UMY4 172 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 HYOU1Q9Y4L1 999 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 PCDHGC5Q9Y5F6 944 aa17.7■□□□□ 0.42
LDB3-208ENST00000623007 CES2O00748 559 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 ARIH2O95376 493 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 ABL1P00519 1130 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 ADRB2P07550 413 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 INHBEP58166 350 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 POU5F1Q01860 360 aaKnown RBP17.69■□□□□ 0.42
LDB3-208ENST00000623007 GCNT1Q02742 428 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 MAPK6Q16659 721 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 TAS1R3Q7RTX0 852 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 ABHD16BQ9H3Z7 469 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 UBE2TQ9NPD8 197 aaPredicted RBP17.69■□□□□ 0.42
LDB3-208ENST00000623007 RAB20Q9NX57 234 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 NENFQ9UMX5 172 aa17.69■□□□□ 0.42
LDB3-208ENST00000623007 A0A0B4J269 797 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 LRRIQ3A6PVS8 624 aaPredicted RBP17.68■□□□□ 0.42
LDB3-208ENST00000623007 TISP43B9A030 160 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 SORBS3O60504 671 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 PPFIA4O75335 1185 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 TOM1L1O75674 476 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 TNFAIP3P21580 790 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 DLG4P78352 724 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 PLCB4Q15147 1175 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 C1orf220Q5T0J3 134 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 PHLDB3Q6NSJ2 640 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 PPP1R2P3Q6NXS1 205 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 RUBCNQ92622 972 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 SAAL1Q96ER3 474 aa17.68■□□□□ 0.42
LDB3-208ENST00000623007 TRPC6Q9Y210 931 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms