RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 TRIM32Q13049 653 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 CCDC70Q6NSX1 233 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 TAF2Q6P1X5 1199 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 FRMD5Q7Z6J6 570 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 ZBTB45Q96K62 511 aaPredicted RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 FUCA2Q9BTY2 467 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 DDX20Q9UHI6 824 aaKnown RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 MAFBQ9Y5Q3 323 aaPredicted RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 MORC2Q9Y6X9 1032 aaPredicted RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 ARFGEF1Q9Y6D6 1849 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 MACROD2A1Z1Q3 448 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 GFPT2O94808 682 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 HSPA6P17066 643 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 NT5DC1Q5TFE4 455 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 NOTUMQ6P988 496 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 DESI2Q9BSY9 194 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 MAGEA1P43355 309 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 TAF12Q16514 161 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 DUOXA2Q1HG44 320 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 KRT39Q6A163 491 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 NUCKS1Q9H1E3 243 aaKnown RBP13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 TOM1L1O75674 476 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 SLC8A3P57103 927 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 BFSP1Q12934 665 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 MYO1EQ12965 1108 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 ARID5BQ14865 1188 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 CCDC122Q5T0U0 273 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 JAKMIP2Q96AA8 810 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 DNAJC25-GNG10A0A024R161 153 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 KRT86O43790 486 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 ZNF200P98182 395 aaPredicted RBP13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 DEFB128Q7Z7B8 93 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 U2AF1L4Q8WU68 220 aaKnown RBP13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 HVCN1Q96D96 273 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 IKZF4Q9H2S9 585 aa13.53□□□□□ -0.24
SCAMP1-207ENST00000621999 GJC1P36383 396 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 YWHAEP62258 255 aaKnown RBP13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 ITGA7Q13683 1181 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 ZNF667Q5HYK9 610 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 GLRA4Q5JXX5 417 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 TREHO43280 583 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 ABCB4P21439 1286 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 CAPSQ13938 189 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 TAPT1Q6NXT6 567 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 SARM1Q6SZW1 724 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 SPIRE2Q8WWL2 714 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 DNAJC12Q9UKB3 198 aa13.52□□□□□ -0.24
SCAMP1-207ENST00000621999 EDNRBP24530 442 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 MOGSQ13724 837 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 FGFBP2Q9BYJ0 223 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 PASKQ96RG2 1323 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 ARHGAP6O43182 974 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 AKAP3O75969 853 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 PRMT2P55345 433 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 PTK2Q05397 1052 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 CRYGNQ8WXF5 182 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 POP1Q99575 1024 aaKnown RBP13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 UBE4BO95155 1302 aa13.52□□□□□ -0.25
SCAMP1-207ENST00000621999 CABYRO75952 493 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 GNRH1P01148 92 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 CASQ1P31415 396 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 DRP2Q13474 957 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 ZNF699Q32M78 642 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 LRRC8AQ8IWT6 810 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 BEST2Q8NFU1 509 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 OGTO15294 1046 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 KIF4AO95239 1232 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 CDR1P51861 262 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 BFSP2Q13515 415 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 FBXL13Q8NEE6 735 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 MED10Q9BTT4 135 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 LIMA1Q9UHB6 759 aaKnown RBP13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 DNAI1Q9UI46 699 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 PPME1Q9Y570 386 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 GOLGA6L9A6NEM1 432 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 ANKRD63C9JTQ0 380 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 EXTL3O43909 919 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 PDE6CP51160 858 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 TMEM161BQ8NDZ6 487 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 KIF18AQ8NI77 898 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 FLRT1Q9NZU1 646 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 MYO1AQ9UBC5 1043 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 DLEC1Q9Y238 1755 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 GPR182O15218 404 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 ACTN1P12814 892 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 ITGA4P13612 1032 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 LBX1P52954 281 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 ARPP19P56211 112 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 KIAA1841Q6NSI8 718 aa13.51□□□□□ -0.25
SCAMP1-207ENST00000621999 CCDC62Q6P9F0 684 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms