RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 PTGDRQ13258 359 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 PCBP1Q15365 356 aaKnown RBP eCLIP9.49□□□□□ -0.89
GTF2I-219ENST00000621040 ADALQ6DHV7 355 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 GBP6Q6ZN66 633 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 ZNF598Q86UK7 904 aaKnown RBP9.49□□□□□ -0.89
GTF2I-219ENST00000621040 FSIP1Q8NA03 581 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 PNMA5Q96PV4 448 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 SH3GL3Q99963 347 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 INTS13Q9NVM9 706 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 TRMT1Q9NXH9 659 aaKnown RBP9.49□□□□□ -0.89
GTF2I-219ENST00000621040 RGL1Q9NZL6 768 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 CEP290O15078 2479 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 TMEM150BA6NC51 233 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 BACH1O14867 736 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 ACTN1P12814 892 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 ATP1A3P13637 1013 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 MCM7P33993 719 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 RAB30Q15771 203 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 IER5Q5VY09 327 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 LRRC31Q6UY01 552 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 MED15Q96RN5 788 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 FTHL17Q9BXU8 183 aa9.49□□□□□ -0.89
GTF2I-219ENST00000621040 FBXO2Q9UK22 296 aaPredicted RBP9.49□□□□□ -0.89
GTF2I-219ENST00000621040 H3BQF6 201 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 NEBLO76041 1014 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 ERLIN2O94905 339 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 GJB5O95377 273 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 EFEMP2O95967 443 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 DARSP14868 501 aaKnown RBP9.48□□□□□ -0.89
GTF2I-219ENST00000621040 FAM187BQ17R55 369 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 AP1ARQ63HQ0 302 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 RSPH3Q86UC2 560 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 TMEM139Q8IV31 216 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 CLP1Q92989 425 aaKnown RBP9.48□□□□□ -0.89
GTF2I-219ENST00000621040 AK8Q96MA6 479 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 XPO4Q9C0E2 1151 aaKnown RBP9.48□□□□□ -0.89
GTF2I-219ENST00000621040 KIAA1468Q9P260 1216 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 NOC2LQ9Y3T9 749 aaKnown RBP9.48□□□□□ -0.89
GTF2I-219ENST00000621040 EFCAB8A8MWE9 144 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 C9IYK1 514 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 ENPP3O14638 875 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 TADA3O75528 432 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 SEC31AO94979 1220 aaKnown RBP9.48□□□□□ -0.89
GTF2I-219ENST00000621040 BMP15O95972 392 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 PAX7P23759 505 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 RWDD2BP57060 319 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 ZNF174Q15697 407 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 EFCAB12Q6NXP0 572 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 PPP4R3CPQ6ZMV5 832 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.48□□□□□ -0.89
GTF2I-219ENST00000621040 DBF4BQ8NFT6 615 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 RSPH1Q8WYR4 309 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 SEPT8Q92599 483 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 SEMA6BQ9H3T3 888 aa9.48□□□□□ -0.89
GTF2I-219ENST00000621040 ZBTB39O15060 712 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 PBX2P40425 430 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 GOLGA8FQ08AF8 430 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 GOLGA8DPQ0D2H9 430 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 MAPK7Q13164 816 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 PLA2G4FQ68DD2 849 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 DRC7Q8IY82 874 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 KLHL23Q8NBE8 558 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 JPH2Q9BR39 696 aaPredicted RBP9.47□□□□□ -0.89
GTF2I-219ENST00000621040 TRIM6Q9C030 488 aaPredicted RBP9.47□□□□□ -0.89
GTF2I-219ENST00000621040 TRIP11Q15643 1979 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 PRUNE2Q8WUY3 3088 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 A0A1W2PQ27 194 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 A0A1W2PQ64 194 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 A0A1W2PQD8 194 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 CHMP2AO43633 222 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 LPXNO60711 386 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 DNAJB2P25686 324 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 KCNJ6P48051 423 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 GRB10Q13322 594 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 IKBKEQ14164 716 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 SLC5A9Q2M3M2 681 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 NCAPH2Q6IBW4 605 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 TRIM65Q6PJ69 517 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 SHC4Q6S5L8 630 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 TRMT1LQ7Z2T5 733 aaKnown RBP9.47□□□□□ -0.89
GTF2I-219ENST00000621040 MICALL1Q8N3F8 863 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 UIMC1Q96RL1 719 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 IFIH1Q9BYX4 1025 aaKnown RBP9.47□□□□□ -0.89
GTF2I-219ENST00000621040 PADI3Q9ULW8 664 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 HPSEQ9Y251 543 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 PLXNA3P51805 1871 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 DGKIO75912 1065 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 MYBL2P10244 700 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 ATF7P17544 494 aaPredicted RBP9.47□□□□□ -0.89
GTF2I-219ENST00000621040 ERVK-21P61565 698 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 EMC2Q15006 297 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 PREPLQ4J6C6 727 aaPredicted RBP9.47□□□□□ -0.89
GTF2I-219ENST00000621040 CNNM4Q6P4Q7 775 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 UBXN4Q92575 508 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 BPIFA3Q9BQP9 254 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 CCSER1Q9C0I3 900 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 MTIF3Q9H2K0 278 aaKnown RBP9.47□□□□□ -0.89
GTF2I-219ENST00000621040 CHST12Q9NRB3 414 aa9.47□□□□□ -0.89
GTF2I-219ENST00000621040 TCEAL9Q9UHQ7 104 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms