RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZNF862O60290 1169 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 CNPP09543 421 aaKnown RBP9.55□□□□□ -0.88
GPC6-202ENST00000617456 NLRP5P59047 1200 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 DRP2Q13474 957 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 UGCGQ16739 394 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 LETM2Q2VYF4 491 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 RINLQ6ZS11 566 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 SLC5A5Q92911 643 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 DISC1Q9NRI5 854 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 TBC1D13Q9NVG8 400 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 PIN4Q9Y237 131 aaKnown RBP9.55□□□□□ -0.88
GPC6-202ENST00000617456 PPME1Q9Y570 386 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 IRAK3Q9Y616 596 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 DMXL1Q9Y485 3027 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 EPG5Q9HCE0 2579 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 STK36Q9NRP7 1315 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 A0A087WZ62 844 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 KRBA1A5PL33 1030 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 CARNS1A5YM72 827 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 TULP2O00295 520 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 TBX3O15119 743 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 ZNF500O60304 480 aaPredicted RBP9.54□□□□□ -0.88
GPC6-202ENST00000617456 B4GALT3O60512 393 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 DKC1O60832 514 aaKnown RBP eCLIP9.54□□□□□ -0.88
GPC6-202ENST00000617456 OFD1O75665 1012 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 PSMD10O75832 226 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 DCNP07585 359 aaKnown RBP9.54□□□□□ -0.88
GPC6-202ENST00000617456 GCFC2P16383 781 aaKnown RBP9.54□□□□□ -0.88
GPC6-202ENST00000617456 SFPQP23246 707 aaKnown RBP eCLIP9.54□□□□□ -0.88
GPC6-202ENST00000617456 CLCN4P51793 760 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 AK2P54819 239 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 CCT2P78371 535 aaKnown RBP9.54□□□□□ -0.88
GPC6-202ENST00000617456 MTA1Q13330 715 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 MTERF2Q49AM1 385 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 PPP4R3AQ6IN85 833 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 B3GNT9Q6UX72 402 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 KRT25Q7Z3Z0 450 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 ZNF280BQ86YH2 543 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 BLIDQ8IZY5 108 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 ST13P5Q8NFI4 369 aaPredicted RBP9.54□□□□□ -0.88
GPC6-202ENST00000617456 TBCKQ8TEA7 893 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 WASF1Q92558 559 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 FAM20AQ96MK3 541 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 TSPAN18Q96SJ8 248 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 SH2D3AQ9BRG2 576 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 FDXACB1Q9BRP7 624 aaPredicted RBP9.54□□□□□ -0.88
GPC6-202ENST00000617456 TBC1D17Q9HA65 648 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 MAN1C1Q9NR34 630 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 CHST12Q9NRB3 414 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 PDRG1Q9NUG6 133 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 VPS54Q9P1Q0 977 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 IGSF9Q9P2J2 1179 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 SEPT9Q9UHD8 586 aaPredicted RBP9.54□□□□□ -0.88
GPC6-202ENST00000617456 FEZ2Q9UHY8 353 aaPredicted RBP9.54□□□□□ -0.88
GPC6-202ENST00000617456 CEP83Q9Y592 693 aa9.54□□□□□ -0.88
GPC6-202ENST00000617456 CCDC195A0A1B0GUA6 201 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 TMEM150BA6NC51 233 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 DYNC1I1O14576 645 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 MSH4O15457 936 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 PFKFB2O60825 505 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 GAS7O60861 476 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 N4BP1O75113 896 aaKnown RBP9.53□□□□□ -0.88
GPC6-202ENST00000617456 SKIP12755 728 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 NONOQ15233 471 aaKnown RBP eCLIP9.53□□□□□ -0.88
GPC6-202ENST00000617456 XKR3Q5GH77 459 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 CATSPER4Q7RTX7 472 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 POTEDQ86YR6 584 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 RHPN2Q8IUC4 686 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 SLC44A3Q8N4M1 653 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 DCLK2Q8N568 766 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 URGCPQ8TCY9 931 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 GJA10Q969M2 543 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 NLRP4Q96MN2 994 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 FAM193BQ96PV7 902 aaPredicted RBP9.53□□□□□ -0.88
GPC6-202ENST00000617456 MYADMQ96S97 322 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 JPH2Q9BR39 696 aaPredicted RBP9.53□□□□□ -0.88
GPC6-202ENST00000617456 TEKT3Q9BXF9 490 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 NIFKQ9BYG3 293 aaKnown RBP9.53□□□□□ -0.88
GPC6-202ENST00000617456 SEMA4AQ9H3S1 761 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 NCOA5Q9HCD5 579 aaKnown RBP9.53□□□□□ -0.88
GPC6-202ENST00000617456 MRPL17Q9NRX2 175 aaKnown RBP9.53□□□□□ -0.88
GPC6-202ENST00000617456 FAM105AQ9NUU6 356 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 WNT16Q9UBV4 365 aa9.53□□□□□ -0.88
GPC6-202ENST00000617456 PRG3Q9Y2Y8 225 aaPredicted RBP9.53□□□□□ -0.88
GPC6-202ENST00000617456 CACNA1IQ9P0X4 2223 aa9.52□□□□□ -0.88
GPC6-202ENST00000617456 INPPL1O15357 1258 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 EDIL3O43854 480 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 DDHD2O94830 711 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 POMCP01189 267 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 URODP06132 367 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 SPATA31D3P0C874 917 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 SP9P0CG40 484 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 DNM2P50570 870 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 AFF1P51825 1210 aaKnown RBP9.52□□□□□ -0.89
GPC6-202ENST00000617456 PUM1Q14671 1186 aaKnown RBP eCLIP9.52□□□□□ -0.89
GPC6-202ENST00000617456 TARBP2Q15633 366 aaKnown RBP9.52□□□□□ -0.89
GPC6-202ENST00000617456 NPY5RQ15761 445 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 LRCH2Q5VUJ6 765 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 C15orf39Q6ZRI6 1047 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 SPATA31D4Q6ZUB0 917 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms