RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 TSC22D1Q15714 1073 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 NFRKBQ6P4R8 1299 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CCDC149Q6ZUS6 474 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 MIGA2Q7L4E1 593 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 TBC1D19Q8N5T2 526 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 RAD18Q9NS91 495 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 DCDC2Q9UHG0 476 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 STAP1Q9ULZ2 295 aa6.36□□□□□ -1.39
RFX3-212ENST00000617270 CCDC188H7C350 402 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 FGFR4P22455 802 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 CCNE1P24864 410 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 PHKA1P46020 1223 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 SHROOM1Q2M3G4 852 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 MEI1Q5TIA1 1274 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 SLFN12LQ6IEE8 588 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 VN1R5Q7Z5H4 357 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 MICU2Q8IYU8 434 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ZNF564Q8TBZ8 553 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 PIGOQ8TEQ8 1089 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 BLOC1S6Q9UL45 172 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ZNF804BA4D1E1 1349 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 PPEF1O14829 653 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 KLHL18O94889 574 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 KCNA3P22001 575 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 AKT1P31749 480 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 SSTR3P32745 418 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 ZNF746Q6NUN9 644 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 EAF2Q96CJ1 260 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 C17orf80Q9BSJ5 609 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.35□□□□□ -1.39
RFX3-212ENST00000617270 RNPEPQ9H4A4 650 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 CYTH3O43739 400 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 SERPINB3P29508 390 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ADORA1P30542 326 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 SOAT1P35610 550 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 C10orf53Q8N6V4 93 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 TTC13Q8NBP0 860 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 PAGE5Q96GU1 130 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 PANX2Q96RD6 677 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 RNF26Q9BY78 433 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 DDX47Q9H0S4 455 aaKnown RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 DHX35Q9H5Z1 703 aaKnown RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 IL1RL2Q9HB29 575 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ADAM21Q9UKJ8 722 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 GMNCA6NCL1 334 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 MIF4GDA9UHW6 222 aaKnown RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 SEMA3EO15041 775 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ATP9BO43861 1147 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 FAM107AO95990 144 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 BMP3P12645 472 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ATP1A3P13637 1013 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 BCAR1P56945 870 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 TMEM35BQ8NCS4 154 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 SNF8Q96H20 258 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 FHDC1Q9C0D6 1143 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 RERGLQ9H628 205 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 RPAP3Q9H6T3 665 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 DBNDD1Q9H9R9 158 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 PARVBQ9HBI1 364 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 NBPF26B4DH59 902 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 CCDC22O60826 627 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 SRP72O76094 671 aaKnown RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 EPB42P16452 691 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 NCALDP61601 193 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 C11orf96Q7Z7L8 435 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 NBPF15Q8N660 670 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 SNX31Q8N9S9 440 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ATP11CQ8NB49 1132 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 DIS3LQ8TF46 1054 aaKnown RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 MTERF3Q96E29 417 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 CNBD2Q96M20 576 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 LATS2Q9NRM7 1088 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 OLFML3Q9NRN5 406 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 TOPORSQ9NS56 1045 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 C20orf96Q9NUD7 363 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 SLC9A2Q9UBY0 812 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 RFX3P48380 749 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 CAV1Q03135 178 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 RAD51Q06609 339 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 CDKL3Q8IVW4 592 aaPredicted RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 CENPTQ96BT3 561 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 DEPDC7Q96QD5 511 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 BRIP1Q9BX63 1249 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 WWP1Q9H0M0 922 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 KANSL2Q9H9L4 492 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 POLE3Q9NRF9 147 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 MPP6Q9NZW5 540 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 DTNAQ9Y4J8 743 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 UHRF1BP1LA0JNW5 1464 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 IFT140Q96RY7 1462 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 DYTNA2CJ06 578 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 MMP1P03956 469 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 GYS1P13807 737 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 HSPA2P54652 639 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 DYNLL1P63167 89 aaKnown RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 TRIM32Q13049 653 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ZNF568Q3ZCX4 644 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 STAG2Q8N3U4 1231 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 GFM2Q969S9 779 aaKnown RBP6.35□□□□□ -1.39
RFX3-212ENST00000617270 DYNLL2Q96FJ2 89 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms