RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 USP49Q70CQ1 688 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 OTUD6AQ7L8S5 288 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 CATSPER3Q86XQ3 398 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 PDILTQ8N807 584 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 CASP10Q92851 521 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 NACC1Q96RE7 527 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 PYM1Q9BRP8 204 aaKnown RBP16.46■□□□□ 0.23
UBXN1-218ENST00000616865 PANK2Q9BZ23 570 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 DDX19AQ9NUU7 478 aaKnown RBP16.46■□□□□ 0.23
UBXN1-218ENST00000616865 A0A1B0GVL5 298 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 ZNF862O60290 1169 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 SP100P23497 879 aaPredicted RBP16.45■□□□□ 0.22
UBXN1-218ENST00000616865 STAT6P42226 847 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 GPC3P51654 580 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 UBE2HP62256 183 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 SMC1AQ14683 1233 aaKnown RBP16.45■□□□□ 0.22
UBXN1-218ENST00000616865 KARSQ15046 597 aaKnown RBP16.45■□□□□ 0.22
UBXN1-218ENST00000616865 XKR3Q5GH77 459 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 TMC7Q7Z402 723 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 SLC39A11Q8N1S5 342 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 RNF169Q8NCN4 708 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 ZNF668Q96K58 619 aaPredicted RBP16.45■□□□□ 0.22
UBXN1-218ENST00000616865 MMTAG2Q9BU76 263 aaKnown RBP16.45■□□□□ 0.22
UBXN1-218ENST00000616865 SPG21Q9NZD8 308 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 SEPT9Q9UHD8 586 aaPredicted RBP16.45■□□□□ 0.22
UBXN1-218ENST00000616865 KCNH3Q9ULD8 1083 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 DNM3Q9UQ16 869 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 HCFC2Q9Y5Z7 792 aa16.45■□□□□ 0.22
UBXN1-218ENST00000616865 A0A0U1RQF3 1178 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 SSBP05455 408 aaKnown RBP eCLIP16.44■□□□□ 0.22
UBXN1-218ENST00000616865 SPATA31C1P0DKV0 1188 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 DARSP14868 501 aaKnown RBP16.44■□□□□ 0.22
UBXN1-218ENST00000616865 PFKFB1P16118 471 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 PLCG1P19174 1290 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 ZBTB33Q86T24 672 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 ZNF598Q86UK7 904 aaKnown RBP16.44■□□□□ 0.22
UBXN1-218ENST00000616865 HELQQ8TDG4 1101 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 SCLT1Q96NL6 688 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 MRPL9Q9BYD2 267 aaKnown RBP16.44■□□□□ 0.22
UBXN1-218ENST00000616865 CDH22Q9UJ99 828 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 DENND4AQ7Z401 1863 aa16.44■□□□□ 0.22
UBXN1-218ENST00000616865 C2orf71A6NGG8 1288 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 POLR2DO15514 142 aaKnown RBP16.43■□□□□ 0.22
UBXN1-218ENST00000616865 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
UBXN1-218ENST00000616865 LYPLA2O95372 231 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 EOMESO95936 686 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 PTMSP20962 102 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 FGFR4P22455 802 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 AVPR2P30518 371 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 YWHABP31946 246 aaKnown RBP16.43■□□□□ 0.22
UBXN1-218ENST00000616865 MCM4P33991 863 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 SYKP43405 635 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 XKR9Q5GH70 373 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 HYIQ5T013 277 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 CEP57L1Q8IYX8 460 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 KCTD17Q8N5Z5 321 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 MRPL43Q8N983 215 aaKnown RBP16.43■□□□□ 0.22
UBXN1-218ENST00000616865 IQUBQ8NA54 791 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 DHX58Q96C10 678 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 NECTIN4Q96NY8 510 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 PNMA5Q96PV4 448 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 POMKQ9H5K3 350 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 DACT1Q9NYF0 836 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 NR2E1Q9Y466 385 aa16.43■□□□□ 0.22
UBXN1-218ENST00000616865 ZDBF2Q9HCK1 2354 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 MYO15AQ9UKN7 3530 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 ARHGEF35A5YM69 484 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBXN1-218ENST00000616865 NDUFA8P51970 172 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 ITIH3Q06033 890 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 TBC1D8BQ0IIM8 1120 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 ECM1Q16610 540 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 MTERF2Q49AM1 385 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 TMEM119Q4V9L6 283 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 CES5AQ6NT32 575 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 NLRP7Q8WX94 980 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 CCDC34Q96HJ3 373 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 CEP170P1Q96L14 293 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 ADAM7Q9H2U9 754 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 WRAP73Q9P2S5 460 aaPredicted RBP16.42■□□□□ 0.22
UBXN1-218ENST00000616865 STK17AQ9UEE5 414 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 PLXNA3P51805 1871 aa16.42■□□□□ 0.22
UBXN1-218ENST00000616865 A0A087WWV3 80 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 C2CD4DB7Z1M9 353 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 E9PMD0 336 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 CLASP2O75122 1294 aaKnown RBP16.41■□□□□ 0.22
UBXN1-218ENST00000616865 PDGFBP01127 241 aaPredicted RBP16.41■□□□□ 0.22
UBXN1-218ENST00000616865 BCAR1P56945 870 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 DRP2Q13474 957 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 MTMR3Q13615 1198 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 DHX8Q14562 1220 aaKnown RBP16.41■□□□□ 0.22
UBXN1-218ENST00000616865 TARBP2Q15633 366 aaKnown RBP16.41■□□□□ 0.22
UBXN1-218ENST00000616865 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 KREMEN2Q8NCW0 462 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 RSPH1Q8WYR4 309 aa16.41■□□□□ 0.22
UBXN1-218ENST00000616865 TMEM169Q96HH4 297 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms