RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 SPATA6Q9NWH7 488 aaPredicted RBP20.23■□□□□ 0.83
FAM228B-210ENST00000615575 RPL17P18621 184 aaKnown RBP20.22■□□□□ 0.83
FAM228B-210ENST00000615575 STARD6P59095 220 aa20.22■□□□□ 0.83
FAM228B-210ENST00000615575 CDC42EP1Q00587 391 aa20.22■□□□□ 0.83
FAM228B-210ENST00000615575 SNW1Q13573 536 aaKnown RBP20.22■□□□□ 0.83
FAM228B-210ENST00000615575 ELMSAN1Q6PJG2 1045 aa20.22■□□□□ 0.83
FAM228B-210ENST00000615575 PARM1Q6UWI2 310 aa20.22■□□□□ 0.83
FAM228B-210ENST00000615575 SMG8Q8ND04 991 aaKnown RBP20.22■□□□□ 0.83
FAM228B-210ENST00000615575 CNTNAP2Q9UHC6 1331 aa20.22■□□□□ 0.83
FAM228B-210ENST00000615575 TDRD15B5MCY1 1934 aaKnown RBP20.22■□□□□ 0.83
FAM228B-210ENST00000615575 CFAP47Q6ZTR5 3102 aa20.22■□□□□ 0.83
FAM228B-210ENST00000615575 DDX11L8A8MPP1 907 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 TGM5O43548 720 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 MAFO75444 373 aaPredicted RBP20.21■□□□□ 0.83
FAM228B-210ENST00000615575 PSMD10O75832 226 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 PAPLNO95428 1278 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 HOXA11P31270 313 aaPredicted RBP20.21■□□□□ 0.83
FAM228B-210ENST00000615575 NTHL1P78549 312 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 DSG1Q02413 1049 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 ADCK5Q3MIX3 580 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 RNF39Q9H2S5 420 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 BMP2KQ9NSY1 1161 aaPredicted RBP20.21■□□□□ 0.83
FAM228B-210ENST00000615575 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.21■□□□□ 0.83
FAM228B-210ENST00000615575 COL4A3BPQ9Y5P4 624 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 DCDC2BA2VCK2 349 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 SPTLC1O15269 473 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 LAMTOR5O43504 91 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 MLH1P40692 756 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 SCNN1GP51170 649 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 CSTF1Q05048 431 aaKnown RBP20.21■□□□□ 0.83
FAM228B-210ENST00000615575 UBXN2BQ14CS0 331 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 ANO5Q75V66 913 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 ZNF579Q8NAF0 562 aaKnown RBP20.21■□□□□ 0.83
FAM228B-210ENST00000615575 PHKBQ93100 1093 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 ZFP42Q96MM3 310 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 GAD1Q99259 594 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 PRKD2Q9BZL6 878 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 MIOSQ9NXC5 875 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 KANSL3Q9P2N6 904 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 DPP7Q9UHL4 492 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 SMG5Q9UPR3 1016 aaKnown RBP20.21■□□□□ 0.83
FAM228B-210ENST00000615575 SSX2IPQ9Y2D8 614 aa20.21■□□□□ 0.83
FAM228B-210ENST00000615575 CHD8Q9HCK8 2581 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 KANSL1LA0AUZ9 987 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 GAS2O43903 313 aaKnown RBP20.2■□□□□ 0.82
FAM228B-210ENST00000615575 TDP2O95551 362 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 NCLP19338 710 aaKnown RBP20.2■□□□□ 0.82
FAM228B-210ENST00000615575 CD72P21854 359 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 NPEPPSP55786 919 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 DSC1Q08554 894 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 MLF2Q15773 248 aaPredicted RBP20.2■□□□□ 0.82
FAM228B-210ENST00000615575 ZNF528Q3MIS6 628 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 B3GNT9Q6UX72 402 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 CCDC12Q8WUD4 166 aaPredicted RBP20.2■□□□□ 0.82
FAM228B-210ENST00000615575 RABGGTAQ92696 567 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 EIF2AQ9BY44 585 aaKnown RBP20.2■□□□□ 0.82
FAM228B-210ENST00000615575 GPR62Q9BZJ7 368 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 ZDHHC7Q9NXF8 308 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 HES2Q9Y543 173 aa20.2■□□□□ 0.82
FAM228B-210ENST00000615575 ARL5CA6NH57 179 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 FSHRP23945 695 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 LILRA6Q6PI73 481 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 TSSK4Q6SA08 328 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 DHX32Q7L7V1 743 aaKnown RBP20.19■□□□□ 0.82
FAM228B-210ENST00000615575 GRASPQ7Z6J2 395 aaPredicted RBP20.19■□□□□ 0.82
FAM228B-210ENST00000615575 RASEFQ8IZ41 740 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 HDAC7Q8WUI4 952 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 TMEM143Q96AN5 459 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 DDX23Q9BUQ8 820 aaKnown RBP20.19■□□□□ 0.82
FAM228B-210ENST00000615575 APOL6Q9BWW8 343 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 BCO2Q9BYV7 579 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 PLEKHA4Q9H4M7 779 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 CHST7Q9NS84 486 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 VPS54Q9P1Q0 977 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 CACNG4Q9UBN1 327 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 CDV3Q9UKY7 258 aaKnown RBP20.19■□□□□ 0.82
FAM228B-210ENST00000615575 IPPQ9Y573 584 aa20.19■□□□□ 0.82
FAM228B-210ENST00000615575 USP24Q9UPU5 2620 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 ZMYND10O75800 440 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 SRGAP2CP0DJJ0 459 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 ITGA4P13612 1032 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 CPA1P15085 419 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 GNA11P29992 359 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 FUT10Q6P4F1 479 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 RDM1Q8NG50 284 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 SHDQ96IW2 340 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 PARD6AQ9NPB6 346 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 FBXO4Q9UKT5 387 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 USP18Q9UMW8 372 aa20.18■□□□□ 0.82
FAM228B-210ENST00000615575 PRSS55Q6UWB4 352 aaPredicted RBP20.17■□□□□ 0.82
FAM228B-210ENST00000615575 PRPF31Q8WWY3 499 aaKnown RBP20.17■□□□□ 0.82
FAM228B-210ENST00000615575 KXD1Q9BQD3 176 aa20.17■□□□□ 0.82
FAM228B-210ENST00000615575 LTB4R2Q9NPC1 389 aa20.17■□□□□ 0.82
FAM228B-210ENST00000615575 CDH7Q9ULB5 785 aa20.17■□□□□ 0.82
FAM228B-210ENST00000615575 PCDHGA2Q9Y5H1 932 aa20.17■□□□□ 0.82
FAM228B-210ENST00000615575 ARID2Q68CP9 1835 aa20.16■□□□□ 0.82
FAM228B-210ENST00000615575 FAM170BA6NMN3 283 aa20.16■□□□□ 0.82
FAM228B-210ENST00000615575 PRPF3O43395 683 aaKnown RBP20.16■□□□□ 0.82
FAM228B-210ENST00000615575 TGM1P22735 817 aa20.16■□□□□ 0.82
FAM228B-210ENST00000615575 RCAN1P53805 252 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms