RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 VTNP04004 478 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 INSRRP14616 1297 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 FGFR4P22455 802 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 HNRNPH3P31942 346 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 STAT1P42224 750 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 CDR1P51861 262 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MKRN4PQ13434 485 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 PLCB4Q15147 1175 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 LLGL1Q15334 1064 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 CCL14Q16627 93 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 ASTE1Q2TB18 679 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 C2CD6Q53TS8 623 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 EFCAB12Q6NXP0 572 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 NFRKBQ6P4R8 1299 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 ALKBH5Q6P6C2 394 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 FBXO38Q6PIJ6 1188 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 CEP120Q8N960 986 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 EHBP1Q8NDI1 1231 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 CAGE1Q8TC20 777 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 PARD3BQ8TEW8 1205 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 SCLT1Q96NL6 688 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 FNBP1Q96RU3 617 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MPHOSPH6Q99547 160 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 MSTO1Q9BUK6 570 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 DHX33Q9H6R0 707 aaKnown RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 SUCLA2Q9P2R7 463 aaPredicted RBP3.73□□□□□ -1.81
LIG4-205ENST00000614526 APEX2Q9UBZ4 518 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 MYO6Q9UM54 1294 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 PAPPA2Q9BXP8 1791 aa3.73□□□□□ -1.81
LIG4-205ENST00000614526 F8VZ95 297 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 DDX3XO00571 662 aaKnown RBP eCLIP3.72□□□□□ -1.81
LIG4-205ENST00000614526 ADCY6O43306 1168 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 PALMO75781 387 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SEC31AO94979 1220 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 SGPL1O95470 568 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SNAI1O95863 264 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 TGFB3P10600 412 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 KRT5P13647 590 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 LAMTOR4Q0VGL1 99 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 HSP90AA2PQ14568 343 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 TAF1CQ15572 869 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 SLC18A3Q16572 532 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CCDC62Q6P9F0 684 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 FOXR2Q6PJQ5 311 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SV2AQ7L0J3 742 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 GPD1LQ8N335 351 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 NOA1Q8NC60 698 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 COG1Q8WTW3 980 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SCFD2Q8WU76 684 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ZNF516Q92618 1163 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 MS4A14Q96JA4 679 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 MMS19Q96T76 1030 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 MKNK1Q9BUB5 465 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 FAM49AQ9H0Q0 323 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 MINDY3Q9H8M7 445 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 AIPL1Q9NZN9 384 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ARHGAP28Q9P2N2 729 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CDC23Q9UJX2 597 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 AGO2Q9UKV8 859 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 AKT3Q9Y243 479 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 OTOFQ9HC10 1997 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 PTPRJQ12913 1337 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 IGKV6D-21A0A0A0MT36 114 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ZNF233A6NK53 670 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ASB14A6NK59 587 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 TMEM110-MUSTN1A8MSY1 372 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CLDN3O15551 220 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ATMINO43313 823 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 TACC1O75410 805 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 TADA3O75528 432 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 TNFAIP3P21580 790 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SOX5P35711 763 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ARL2P36404 184 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CYP24A1Q07973 514 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CETN1Q12798 172 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 PPP2R5AQ15172 486 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ZNF394Q53GI3 561 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 TAPT1Q6NXT6 567 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SLC9A9Q8IVB4 645 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 OR5B17Q8NGF7 314 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 LMO3Q8TAP4 145 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 LNX1Q8TBB1 728 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 SPIRE2Q8WWL2 714 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 PSPC1Q8WXF1 523 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 GDAP1L1Q96MZ0 367 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 NTPCRQ9BSD7 190 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 MYO1AQ9UBC5 1043 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 NAGPAQ9UK23 515 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ABT1Q9ULW3 272 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 SAR1BQ9Y6B6 198 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 PARP14Q460N5 1801 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 HTTP42858 3142 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 A0A087WZ62 844 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SSU72P8A0A1W2PR75 194 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ZBTB42B2RXF5 422 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 PDE2AO00408 941 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 PHACTR2O75167 634 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 MAFO75444 373 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 ITGBL1O95965 494 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms