RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 THOC1Q96FV9 657 aaKnown RBP17.8■□□□□ 0.44
CNOT3-208ENST00000613073 C12orf42Q96LP6 360 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 STRA6Q9BX79 667 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 AFG3L2Q9Y4W6 797 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 RLFQ13129 1914 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 RGS20O76081 388 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 PLS3P13797 630 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 GCKP35557 465 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 FMO5P49326 533 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 SOX10P56693 466 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 KIAA0753Q2KHM9 967 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 SAMD3Q8N6K7 520 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 ZSWIM2Q8NEG5 633 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 NSUN6Q8TEA1 469 aaKnown RBP17.8■□□□□ 0.44
CNOT3-208ENST00000613073 KIFC3Q9BVG8 833 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 TEX13BQ9BXU2 312 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 DMAC2Q9NW81 257 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 CYP39A1Q9NYL5 469 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 PNMA2Q9UL42 364 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 PHIPQ8WWQ0 1821 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 UBE4BO95155 1302 aa17.8■□□□□ 0.44
CNOT3-208ENST00000613073 RBAK-RBAKDNI3L0D1 243 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 PJA2O43164 708 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 USP2O75604 605 aaPredicted RBP17.79■□□□□ 0.44
CNOT3-208ENST00000613073 LMNB1P20700 586 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 JAK3P52333 1124 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 KRT76Q01546 638 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 ANKRD20A8PQ5CZ79 823 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 C4orf19Q8IY42 314 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 ALS2CR12Q96Q35 445 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 CBWD1Q9BRT8 395 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 ADAMTS5Q9UNA0 930 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 PLAAQ9Y263 795 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 SPDYE16A6NNV3 312 aaPredicted RBP17.79■□□□□ 0.44
CNOT3-208ENST00000613073 KLRC1P26715 233 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 DLG4P78352 724 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 PLCB4Q15147 1175 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 SUPT20HL1Q3ZLR7 823 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 ANO5Q75V66 913 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 HAUS6Q7Z4H7 955 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 GABBR1Q9UBS5 961 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 HYOU1Q9Y4L1 999 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 EME2A4GXA9 379 aaPredicted RBP17.79■□□□□ 0.44
CNOT3-208ENST00000613073 SCTRP47872 440 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 VGLL4Q14135 290 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 NFIL3Q16649 462 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 IFT20Q8IY31 132 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 PROCA1Q8NCQ7 364 aaPredicted RBP17.79■□□□□ 0.44
CNOT3-208ENST00000613073 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
CNOT3-208ENST00000613073 NOX5Q96PH1 765 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 PAGR1Q9BTK6 254 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 MKNK1Q9BUB5 465 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 MOV10L1Q9BXT6 1211 aaKnown RBP17.79■□□□□ 0.44
CNOT3-208ENST00000613073 ACAD9Q9H845 621 aa17.79■□□□□ 0.44
CNOT3-208ENST00000613073 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.79■□□□□ 0.44
CNOT3-208ENST00000613073 PCNTO95613 3336 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 CCDC169A6NNP5 214 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 RTN2O75298 545 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 GFPT2O94808 682 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 LYPLA2O95372 231 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 SFNP31947 248 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 SARNPP82979 210 aaKnown RBP17.78■□□□□ 0.44
CNOT3-208ENST00000613073 ODF2Q5BJF6 829 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 TREML2Q5T2D2 321 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 PCDHA10Q9Y5I2 948 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 TMCO5BA8MYB1 307 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 OAZ1P54368 228 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 MYO1EQ12965 1108 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 SWSAP1Q6NVH7 229 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 STAMBPL1Q96FJ0 436 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 INPP4AQ96PE3 977 aaPredicted RBP17.78■□□□□ 0.44
CNOT3-208ENST00000613073 KRT12Q99456 494 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 HOXC10Q9NYD6 342 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 KIAA1217Q5T5P2 1943 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 LOXHD1Q8IVV2 1947 aa17.78■□□□□ 0.44
CNOT3-208ENST00000613073 DOCK5Q9H7D0 1870 aa17.77■□□□□ 0.44
CNOT3-208ENST00000613073 ADM5C9JUS6 153 aa17.77■□□□□ 0.44
CNOT3-208ENST00000613073 ZNF862O60290 1169 aa17.77■□□□□ 0.44
CNOT3-208ENST00000613073 KCNA2P16389 499 aa17.77■□□□□ 0.44
CNOT3-208ENST00000613073 BFSP1Q12934 665 aa17.77■□□□□ 0.44
CNOT3-208ENST00000613073 HLTFQ14527 1009 aaKnown RBP eCLIP17.77■□□□□ 0.44
CNOT3-208ENST00000613073 HIBCHQ6NVY1 386 aaPredicted RBP17.77■□□□□ 0.44
CNOT3-208ENST00000613073 ACCSQ96QU6 501 aa17.77■□□□□ 0.44
CNOT3-208ENST00000613073 ACTR5Q9H9F9 607 aaPredicted RBP17.77■□□□□ 0.44
CNOT3-208ENST00000613073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.77■□□□□ 0.443e-7■■■■■ 46.3
CNOT3-208ENST00000613073 GOLGA8IPA6NC78 632 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 GMNCA6NCL1 334 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 GOLGA8JA6NMD2 632 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 LRRN2O75325 713 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 FSTL1Q12841 308 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 TLDC1Q6P9B6 456 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.77■□□□□ 0.43
CNOT3-208ENST00000613073 CASKIN2Q8WXE0 1202 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 GPRASP2Q96D09 838 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 SEC16BQ96JE7 1060 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 CEP170P1Q96L14 293 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 TMEM206Q9H813 350 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 KIF9Q9HAQ2 790 aa17.77■□□□□ 0.43
CNOT3-208ENST00000613073 LUC7LQ9NQ29 371 aaKnown RBP17.77■□□□□ 0.43
CNOT3-208ENST00000613073 SNCAIPQ9Y6H5 919 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms