RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NCOA4Q13772 614 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CCDC6Q16204 474 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 Q4G0T1 1027 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GNASQ5JWF2 1037 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CENPPQ6IPU0 288 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 DARS2Q6PI48 645 aaKnown RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GSPT2Q8IYD1 628 aaKnown RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GBA2Q9HCG7 927 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 PLCB1Q9NQ66 1216 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 IGSF9BQ9UPX0 1349 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 A8MXQ7 604 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 ZNF185O15231 689 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 EIF3DO15371 548 aaKnown RBP eCLIP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 HSPA6P17066 643 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CLCN3P51790 818 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GALCP54803 685 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 PSMC1P62191 440 aaKnown RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CBWD2Q8IUF1 395 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CCDC110Q8TBZ0 833 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 RAET1EQ8TD07 263 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 ZNF384Q8TF68 577 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 VPS33BQ9H267 617 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GOLPH3Q9H4A6 298 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GPBP1L1Q9HC44 474 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CHORDC1Q9UHD1 332 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 ANAPC5Q9UJX4 755 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 SNX9Q9Y5X1 595 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 YDJCA8MPS7 323 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 MIF4GDA9UHW6 222 aaKnown RBP7.78□□□□□ -1.16
CSDE1-218ENST00000610726 PIK3R2O00459 728 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 SLC26A4O43511 780 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 HBP1O60381 514 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CSDE1O75534 798 aaKnown RBP7.78□□□□□ -1.16
CSDE1-218ENST00000610726 NLRP11P59045 1033 aaKnown RBP7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CASP8Q14790 479 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 PGM5Q15124 567 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 PCNX4Q63HM2 1172 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CCDC13Q8IYE1 715 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 KIAA0895Q8NCT3 520 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 RFFLQ8WZ73 363 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 P3H4Q92791 437 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 PURBQ96QR8 312 aaKnown RBP7.78□□□□□ -1.16
CSDE1-218ENST00000610726 ERGIC2Q96RQ1 377 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 GPRC5DQ9NZD1 345 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 TBX20Q9UMR3 447 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 PDE4DIPQ5VU43 2346 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 SSU72P8A0A1W2PR75 194 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 SLITRK3O94933 977 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CYP2C8P10632 490 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CYP2C9P11712 490 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 SAT1P21673 171 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 ALDH3A1P30838 453 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 NPTX2P47972 431 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 IFNAR2P48551 515 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 OTOP1Q7RTM1 612 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 SCN4BQ8IWT1 228 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 BBOF1Q8ND07 529 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CPA5Q8WXQ8 436 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 FMO2Q99518 471 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 MKNK1Q9BUB5 465 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 ZFYVE28Q9HCC9 887 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 MED4Q9NPJ6 270 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 BLOC1S4Q9NUP1 217 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CPA4Q9UI42 421 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 FAN1Q9Y2M0 1017 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 MEIS2O14770 477 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 MAGEB2O15479 319 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 AKAP3O75969 853 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 HLA-DRAP01903 254 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 SCP2P22307 547 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 RFX1P22670 979 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 ADORA2BP29275 332 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 PHBP35232 272 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 RFC5P40937 340 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 MMP14P50281 582 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 GTF2A2P52657 109 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 GABPB1Q06547 395 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-218ENST00000610726 FUT2Q10981 343 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 C6orf163Q5TEZ5 329 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 KLHDC7AQ5VTJ3 777 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 IER5Q5VY09 327 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 MOB2Q70IA6 237 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 ENOSF1Q7L5Y1 443 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CEP57Q86XR8 500 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 C10orf67Q8IYJ2 551 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 TRPM4Q8TD43 1214 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 FBXO41Q8TF61 875 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 SMC6Q96SB8 1091 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 IFT122Q9HBG6 1241 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 AGO4Q9HCK5 861 aaKnown RBP7.78□□□□□ -1.16
CSDE1-218ENST00000610726 A1CFQ9NQ94 594 aaKnown RBP7.78□□□□□ -1.16
CSDE1-218ENST00000610726 HOMER3Q9NSC5 361 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 TBK1Q9UHD2 729 aa7.78□□□□□ -1.16
CSDE1-218ENST00000610726 CCDC188H7C350 402 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 WEE2P0C1S8 567 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 HOXD10P28358 340 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 SARSP49591 514 aaKnown RBP7.77□□□□□ -1.16
CSDE1-218ENST00000610726 VGLL4Q14135 290 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 BBS9Q3SYG4 887 aa7.77□□□□□ -1.16
CSDE1-218ENST00000610726 ATF7IP2Q5U623 682 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms