RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 PJA1Q8NG27 643 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 NLRP4Q96MN2 994 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 SH2D3AQ9BRG2 576 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 PRKD2Q9BZL6 878 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.78■□□□□ 0.28
SSBP4-214ENST00000607020 FNIP2Q9P278 1114 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 DENND4AQ7Z401 1863 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 NID2Q14112 1375 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 TPRP12270 2363 aaKnown RBP16.77■□□□□ 0.28
SSBP4-214ENST00000607020 GAS2O43903 313 aaKnown RBP16.77■□□□□ 0.28
SSBP4-214ENST00000607020 GLULP15104 373 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 SDHBP21912 280 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 PCBP1Q15365 356 aaKnown RBP eCLIP16.77■□□□□ 0.285e-7■■■□□ 17.8
SSBP4-214ENST00000607020 SPECC1Q5M775 1068 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 FBXL16Q8N461 479 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 DCLK2Q8N568 766 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 GPR161Q8N6U8 529 aaKnown RBP16.77■□□□□ 0.28
SSBP4-214ENST00000607020 SMG8Q8ND04 991 aaKnown RBP16.77■□□□□ 0.28
SSBP4-214ENST00000607020 GJA10Q969M2 543 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 MBOAT7Q96N66 472 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 DDX23Q9BUQ8 820 aaKnown RBP16.77■□□□□ 0.28
SSBP4-214ENST00000607020 OSBPL6Q9BZF3 934 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 SH3GLB2Q9NR46 395 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 FBXO4Q9UKT5 387 aa16.77■□□□□ 0.28
SSBP4-214ENST00000607020 PRG3Q9Y2Y8 225 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-214ENST00000607020 CACNA1BQ00975 2339 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
SSBP4-214ENST00000607020 OR1G1P47890 313 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 NTRK3Q16288 839 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 MOXD1Q6UVY6 613 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 ETNPPLQ8TBG4 499 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 PRPF31Q8WWY3 499 aaKnown RBP16.76■□□□□ 0.27
SSBP4-214ENST00000607020 SLC7A3Q8WY07 619 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 HINFPQ9BQA5 517 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
SSBP4-214ENST00000607020 DHX33Q9H6R0 707 aaKnown RBP16.76■□□□□ 0.27
SSBP4-214ENST00000607020 MINDY3Q9H8M7 445 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 PIDD1Q9HB75 910 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 NUMBLQ9Y6R0 609 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 DNAH14Q0VDD8 3507 aa16.76■□□□□ 0.27
SSBP4-214ENST00000607020 FRYLO94915 3013 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 POTEMA6NI47 508 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 SPTLC1O15269 473 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 ASAP2O43150 1006 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 TGM5O43548 720 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 NR1I2O75469 434 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 ITGA4P13612 1032 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 AXLP30530 894 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 AKAP17AQ02040 695 aaKnown RBP16.75■□□□□ 0.27
SSBP4-214ENST00000607020 RSPO4Q2I0M5 234 aaPredicted RBP16.75■□□□□ 0.27
SSBP4-214ENST00000607020 TBCKQ8TEA7 893 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 PSPC1Q8WXF1 523 aaKnown RBP16.75■□□□□ 0.27
SSBP4-214ENST00000607020 PHKBQ93100 1093 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 COLEC11Q9BWP8 271 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 PPP4R2Q9NY27 417 aa16.75■□□□□ 0.27
SSBP4-214ENST00000607020 KANSL1LA0AUZ9 987 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 ARL5CA6NH57 179 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 DKC1O60832 514 aaKnown RBP eCLIP16.74■□□□□ 0.27
SSBP4-214ENST00000607020 ZMYND10O75800 440 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 SPATA31D3P0C874 917 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 IFNAR1P17181 557 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 RFC5P40937 340 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 QARSP47897 775 aaKnown RBP16.74■□□□□ 0.27
SSBP4-214ENST00000607020 GPC5P78333 572 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 CREMQ03060 361 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 PRKCQQ04759 706 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 LAMTOR4Q0VGL1 99 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 USP41Q3LFD5 358 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 VARS2Q5ST30 1063 aaKnown RBP16.74■□□□□ 0.27
SSBP4-214ENST00000607020 RSPO2Q6UXX9 243 aaPredicted RBP16.74■□□□□ 0.27
SSBP4-214ENST00000607020 SPATA31D4Q6ZUB0 917 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 PALB2Q86YC2 1186 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 GAD1Q99259 594 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 FOXQ1Q9C009 403 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 MIOSQ9NXC5 875 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
SSBP4-214ENST00000607020 IPPQ9Y573 584 aa16.74■□□□□ 0.27
SSBP4-214ENST00000607020 SRGAP2CP0DJJ0 459 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 MAGEA9P43362 315 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 NPEPPSP55786 919 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 FGD1P98174 961 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 PLA2G4FQ68DD2 849 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 GET4Q7L5D6 327 aaPredicted RBP16.73■□□□□ 0.27
SSBP4-214ENST00000607020 ZBTB44Q8NCP5 570 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 NELL1Q92832 810 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 KCNB2Q92953 911 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 CNTNAP3BQ96NU0 1288 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 RPP25Q9BUL9 199 aaKnown RBP16.73■□□□□ 0.27
SSBP4-214ENST00000607020 AGXT2Q9BYV1 514 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 BCO2Q9BYV7 579 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 CNTNAP3Q9BZ76 1288 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 GPR62Q9BZJ7 368 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 VPS54Q9P1Q0 977 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 CDH7Q9ULB5 785 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 GIT1Q9Y2X7 761 aa16.73■□□□□ 0.27
SSBP4-214ENST00000607020 PCDHGA2Q9Y5H1 932 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms