RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 DSC1Q08554 894 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 RAD51AP2Q09MP3 1159 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 TFDP1Q14186 410 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 DUSP6Q16828 381 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 FAM187BQ17R55 369 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 HAUS3Q68CZ6 603 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 PTCRAQ6ISU1 281 aaPredicted RBP11.81□□□□□ -0.52
TUBE1-210ENST00000604967 NOTUMQ6P988 496 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 GLB1LQ6UWU2 654 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 COLGALT2Q8IYK4 626 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 EFHBQ8N7U6 833 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 IGSF21Q96ID5 467 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 APOL6Q9BWW8 343 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 GBP3Q9H0R5 595 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 BLOC1S4Q9NUP1 217 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 SPG21Q9NZD8 308 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 KLK14Q9P0G3 267 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 LZTS1Q9Y250 596 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 KIF3AQ9Y496 699 aa11.81□□□□□ -0.52
TUBE1-210ENST00000604967 C2orf71A6NGG8 1288 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 K7ELQ4 463 aaPredicted RBP11.8□□□□□ -0.52
TUBE1-210ENST00000604967 TNFRSF10AO00220 468 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 PTGESO14684 152 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 ERLIN2O94905 339 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 AXLP30530 894 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 NAMPTP43490 491 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 NPTX2P47972 431 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
TUBE1-210ENST00000604967 UBE3AQ05086 875 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 ZRSR1Q15695 479 aaKnown RBP11.8□□□□□ -0.52
TUBE1-210ENST00000604967 NAB2Q15742 525 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 SPECC1Q5M775 1068 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 ARL6IP4Q66PJ3 421 aaKnown RBP11.8□□□□□ -0.52
TUBE1-210ENST00000604967 KANK3Q6NY19 840 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 EP400NLQ6ZTU2 488 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 FAM178BQ8IXR5 827 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 ABI1Q8IZP0 508 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
TUBE1-210ENST00000604967 SNX21Q969T3 373 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 INTS4Q96HW7 963 aaKnown RBP11.8□□□□□ -0.52
TUBE1-210ENST00000604967 CCDC43Q96MW1 224 aaKnown RBP11.8□□□□□ -0.52
TUBE1-210ENST00000604967 TCF25Q9BQ70 676 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 PAAF1Q9BRP4 392 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 ZBP1Q9H171 429 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 AAASQ9NRG9 546 aa11.8□□□□□ -0.52
TUBE1-210ENST00000604967 FBXO2Q9UK22 296 aaPredicted RBP11.8□□□□□ -0.52
TUBE1-210ENST00000604967 ACKR2O00590 384 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 MBTPS2O43462 519 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 LILRB3O75022 631 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 PRKCBP05771 671 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 SKIP12755 728 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 ITGA4P13612 1032 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 MARCKSP29966 332 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 PKP1Q13835 747 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 KARSQ15046 597 aaKnown RBP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 PCBP1Q15365 356 aaKnown RBP eCLIP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 KRT79Q5XKE5 535 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 SLC27A1Q6PCB7 646 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 SYCE2Q6PIF2 218 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 RNF168Q8IYW5 571 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 CEP120Q8N960 986 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 MRPL43Q8N983 215 aaKnown RBP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 SYT2Q8N9I0 419 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 EPSTI1Q96J88 318 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 CLIC6Q96NY7 704 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 USP28Q96RU2 1077 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 MRPL9Q9BYD2 267 aaKnown RBP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 HAPLN2Q9GZV7 340 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 S1PR5Q9H228 398 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 TLE6Q9H808 572 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 PTPRHQ9HD43 1115 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 PRMT7Q9NVM4 692 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
TUBE1-210ENST00000604967 ARHGAP28Q9P2N2 729 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 DNM3Q9UQ16 869 aa11.79□□□□□ -0.52
TUBE1-210ENST00000604967 A0A087X0B3 334 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 NRP1O14786 923 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 CLASP2O75122 1294 aaKnown RBP11.78□□□□□ -0.52
TUBE1-210ENST00000604967 PLA2G4BP0C869 781 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 LIG1P18858 919 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 PLCG1P19174 1290 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 PEX3P56589 373 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 CSPP1Q1MSJ5 1256 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 AAK1Q2M2I8 961 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 DDX53Q86TM3 631 aaKnown RBP11.78□□□□□ -0.52
TUBE1-210ENST00000604967 CABP7Q86V35 215 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 VPS52Q8N1B4 723 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 SMRP1Q8NCR6 262 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 MICAL1Q8TDZ2 1067 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 PGBD4Q96DM1 585 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 ZBTB45Q96K62 511 aaPredicted RBP11.78□□□□□ -0.52
TUBE1-210ENST00000604967 B3GALT6Q96L58 329 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 EPHX3Q9H6B9 360 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 C11orf16Q9NQ32 467 aa11.78□□□□□ -0.52
TUBE1-210ENST00000604967 SNTG2Q9NY99 539 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms