RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 UBXN11Q5T124 520 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 ATF7IP2Q5U623 682 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 PBX4Q9BYU1 374 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 PDZD7Q9H5P4 517 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 ELAC1Q9H777 363 aaKnown RBP17.1■□□□□ 0.33
CDCA3-211ENST00000603043 TBX20Q9UMR3 447 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 PCDHB2Q9Y5E7 798 aa17.1■□□□□ 0.33
CDCA3-211ENST00000603043 GOLGA6L22H0YM25 854 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 KINO60870 393 aaKnown RBP17.09■□□□□ 0.33
CDCA3-211ENST00000603043 GCNT3O95395 438 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 EIF2AQ9BY44 585 aaKnown RBP17.09■□□□□ 0.33
CDCA3-211ENST00000603043 TRIM6Q9C030 488 aaPredicted RBP17.09■□□□□ 0.33
CDCA3-211ENST00000603043 PBX2P40425 430 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 CASP5P51878 434 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 EHHADHQ08426 723 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 DPYDQ12882 1025 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 POSTNQ15063 836 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 HPS3Q969F9 1004 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 BICD1Q96G01 975 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 YME1L1Q96TA2 773 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 ACO2Q99798 780 aaKnown RBP17.09■□□□□ 0.33
CDCA3-211ENST00000603043 TARS2Q9BW92 718 aaKnown RBP17.09■□□□□ 0.33
CDCA3-211ENST00000603043 TNFSF13BQ9Y275 285 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 INSL6Q9Y581 213 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 PCDHA11Q9Y5I1 949 aa17.09■□□□□ 0.33
CDCA3-211ENST00000603043 KLRC4O43908 158 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 ZNF623O75123 536 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 PPP1R37O75864 691 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 DGKIO75912 1065 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 NPTXRO95502 500 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 EOMESO95936 686 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 MYBP10242 640 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.33
CDCA3-211ENST00000603043 RAB30Q15771 203 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 FAM26FQ5R3K3 315 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.33
CDCA3-211ENST00000603043 MAP4K3Q8IVH8 894 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 HVCN1Q96D96 273 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 RAD9AQ99638 391 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 FGFBP2Q9BYJ0 223 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 EXOC1Q9NV70 894 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 MSRAQ9UJ68 235 aa17.08■□□□□ 0.33
CDCA3-211ENST00000603043 COL4A6Q14031 1691 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
CDCA3-211ENST00000603043 HNRNPDLO14979 420 aaKnown RBP17.08■□□□□ 0.32
CDCA3-211ENST00000603043 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.32
CDCA3-211ENST00000603043 MYOGP15173 224 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 DNAJB2P25686 324 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 HTRA4P83105 476 aaPredicted RBP17.08■□□□□ 0.32
CDCA3-211ENST00000603043 PNOCQ13519 176 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 ALCAMQ13740 583 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 KMT5BQ4FZB7 885 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 EEF1DP3Q658K8 133 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 ZPBP2Q6X784 338 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 STRA6Q9BX79 667 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 HOOK1Q9UJC3 728 aaKnown RBP17.08■□□□□ 0.32
CDCA3-211ENST00000603043 IPPQ9Y573 584 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 PCDHB13Q9Y5F0 798 aa17.08■□□□□ 0.32
CDCA3-211ENST00000603043 FGFR1P11362 822 aa17.07■□□□□ 0.32
CDCA3-211ENST00000603043 ZNF568Q3ZCX4 644 aa17.07■□□□□ 0.32
CDCA3-211ENST00000603043 STXBP4Q6ZWJ1 553 aa17.07■□□□□ 0.32
CDCA3-211ENST00000603043 APBB1IPQ7Z5R6 666 aaPredicted RBP17.07■□□□□ 0.32
CDCA3-211ENST00000603043 SMG8Q8ND04 991 aaKnown RBP17.07■□□□□ 0.32
CDCA3-211ENST00000603043 LPPQ93052 612 aa17.07■□□□□ 0.32
CDCA3-211ENST00000603043 PGBD4Q96DM1 585 aa17.07■□□□□ 0.32
CDCA3-211ENST00000603043 RC3H2Q9HBD1 1191 aaKnown RBP17.07■□□□□ 0.32
CDCA3-211ENST00000603043 ANKFY1Q9P2R3 1169 aa17.07■□□□□ 0.32
CDCA3-211ENST00000603043 YBX2Q9Y2T7 364 aaKnown RBP17.07■□□□□ 0.32
CDCA3-211ENST00000603043 HOXA2O43364 376 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 TOM1L1O75674 476 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 PROZP22891 400 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 LIG4P49917 911 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 DCAF4L1Q3SXM0 396 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 L1TD1Q5T7N2 865 aaKnown RBP17.06■□□□□ 0.32
CDCA3-211ENST00000603043 MPZL3Q6UWV2 235 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 GLIS3Q8NEA6 775 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
CDCA3-211ENST00000603043 TCHPQ9BT92 498 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 NXF3Q9H4D5 531 aaKnown RBP17.06■□□□□ 0.32
CDCA3-211ENST00000603043 PTPRHQ9HD43 1115 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 HES2Q9Y543 173 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 MEIS3P2A8K0S8 358 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 PIGRP01833 764 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 CA3P07451 260 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 GATMP50440 423 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 KCNA1Q09470 495 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 MRPL10Q7Z7H8 261 aaKnown RBP17.06■□□□□ 0.32
CDCA3-211ENST00000603043 ELOA2Q8IYF1 753 aaPredicted RBP17.06■□□□□ 0.32
CDCA3-211ENST00000603043 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 ABI1Q8IZP0 508 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 TIFAQ96CG3 184 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 ZNF689Q96CS4 500 aaPredicted RBP17.06■□□□□ 0.32
CDCA3-211ENST00000603043 LRCH3Q96II8 777 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 ACCSQ96QU6 501 aa17.06■□□□□ 0.32
CDCA3-211ENST00000603043 SLC39A2Q9NP94 309 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms