RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 HAUS6Q7Z4H7 955 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 ZNF598Q86UK7 904 aaKnown RBP17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 DNAJC19Q96DA6 116 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 BICD1Q96G01 975 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 MRPL9Q9BYD2 267 aaKnown RBP17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 TTYH1Q9H313 450 aaPredicted RBP17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 PANK4Q9NVE7 773 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 COL4A6Q14031 1691 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 MAPTP10636 758 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 AFMP43652 599 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 UBXN11Q5T124 520 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 MRPL10Q7Z7H8 261 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 CDR2LQ86X02 465 aaPredicted RBP17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 SFR1Q86XK3 245 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 URGCPQ8TCY9 931 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 HELQQ8TDG4 1101 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 ARNTL2Q8WYA1 636 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 TCHPQ9BT92 498 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 EIF2AQ9BY44 585 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 TRIM9Q9C026 710 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 PDZD7Q9H5P4 517 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 MRPL44Q9H9J2 332 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 RC3H2Q9HBD1 1191 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 AAASQ9NRG9 546 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 SERTAD1Q9UHV2 236 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 HPSEQ9Y251 543 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 TNFSF13BQ9Y275 285 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 IPPQ9Y573 584 aa17.59■□□□□ 0.41
PPFIA3-213ENST00000602905 FAM237AA0A1B0GTK4 181 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 ATF7P17544 494 aaPredicted RBP17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 MATR3P43243 847 aaKnown RBP eCLIP17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 GATMP50440 423 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 NDUFA8P51970 172 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 ERVK-21P61565 698 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 LONRF3Q496Y0 759 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 NT5DC1Q5TFE4 455 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 STXBP4Q6ZWJ1 553 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 LRRC43Q8N309 656 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 LPPQ93052 612 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 GAS2L1Q99501 681 aaPredicted RBP17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 ACO2Q99798 780 aaKnown RBP17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 C7orf25Q9BPX7 421 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 APOL6Q9BWW8 343 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 CERS4Q9HA82 394 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 RSAD1Q9HA92 442 aa17.58■□□□□ 0.4
PPFIA3-213ENST00000602905 TDRD15B5MCY1 1934 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 NMT1P30419 496 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 CTNNB1P35222 781 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 LIG4P49917 911 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 ALCAMQ13740 583 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 ZNF568Q3ZCX4 644 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 CNNM4Q6P4Q7 775 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 ZPBP2Q6X784 338 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 TAS1R3Q7RTX0 852 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 TMEM192Q8IY95 271 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 FBXO22Q8NEZ5 403 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 KCNN1Q92952 543 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 CCDC47Q96A33 483 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 HVCN1Q96D96 273 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 CASD1Q96PB1 797 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 TARS2Q9BW92 718 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 ST6GALNAC4Q9H4F1 302 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 OLFML3Q9NRN5 406 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 KANSL3Q9P2N6 904 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 PARP2Q9UGN5 583 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 MTUS1Q9ULD2 1270 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 TBX20Q9UMR3 447 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 INPP5FQ9Y2H2 1132 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 GIT1Q9Y2X7 761 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 PCDHB13Q9Y5F0 798 aa17.57■□□□□ 0.4
PPFIA3-213ENST00000602905 KIAA1671Q9BY89 1806 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 CITO14578 2027 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 FRMD3A2A2Y4 597 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 CARNS1A5YM72 827 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 TTLL13PA6NNM8 815 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 ACTN4O43707 911 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 ARHGEF15O94989 841 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 GCNT3O95395 438 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 MYL1P05976 194 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 RB1P06400 928 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 GTF2BQ00403 316 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 RNASELQ05823 741 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 COASYQ13057 564 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 GRIN2CQ14957 1233 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 NOMO2Q5JPE7 1267 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 CLLU1OSQ5K130 101 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 KANK3Q6NY19 840 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 MPZL3Q6UWV2 235 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 ZNF720Q7Z2F6 126 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 SMG8Q8ND04 991 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 CLP1Q92989 425 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 PAGE5Q96GU1 130 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 FAM193BQ96PV7 902 aaPredicted RBP17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 C17orf80Q9BSJ5 609 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 NXF3Q9H4D5 531 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 PRDM12Q9H4Q4 367 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 RNF19AQ9NV58 838 aa17.56■□□□□ 0.4
PPFIA3-213ENST00000602905 TYW1Q9NV66 732 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms