RNA–Protein interactions for RNA: ENST00000602173.5

RAB4B-208, Transcript of RAB4B, member RAS oncogene family, human

TSL 3

Gene RAB4B, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB4B-208	ENST00000602173	ARF4	P18085	180 aa	Predicted RBP	13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	SAFB	Q15424	915 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	PTPN14	Q15678	1187 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	CES5A	Q6NT32	575 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	NOTUM	Q6P988	496 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	CATSPER3	Q86XQ3	398 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	CCDC83	Q8IWF9	413 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	C12orf76	Q8N812	135 aa	Predicted RBP	13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	MFSD14A	Q96MC6	490 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	NECTIN4	Q96NY8	510 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	FAM193B	Q96PV7	902 aa	Predicted RBP	13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	GAD1	Q99259	594 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	LLPH	Q9BRT6	129 aa	Known RBP	13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	CSRNP2	Q9H175	543 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	POMK	Q9H5K3	350 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	TUFT1	Q9NNX1	390 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	UBN1	Q9NPG3	1134 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	FAN1	Q9Y2M0	1017 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	DOCK8	Q8NF50	2099 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	ARL5C	A6NH57	179 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	MED24	O75448	989 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	NCBP1	Q09161	790 aa	Known RBP	13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	RARS2	Q5T160	578 aa	Known RBP	13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	KANK3	Q6NY19	840 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	COLGALT2	Q8IYK4	626 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	TMEM87A	Q8NBN3	555 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	C8orf76	Q96K31	380 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	FBXL18	Q96ME1	805 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	CCDC43	Q96MW1	224 aa	Known RBP	13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	KIF2C	Q99661	725 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	KCNH6	Q9H252	994 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	FOXP1	Q9H334	677 aa	Predicted RBP	13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	MARCH5	Q9NX47	278 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	MIOS	Q9NXC5	875 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	STK39	Q9UEW8	545 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	HES2	Q9Y543	173 aa		13.88	□□□□□ -0.19
RAB4B-208	ENST00000602173	B4GALT5	O43286	388 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	USO1	O60763	962 aa	Known RBP	13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	EFEMP2	O95967	443 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	CNP	P09543	421 aa	Known RBP	13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	WEE2	P0C1S8	567 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	OR52Z1	P0C646	297 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	SP100	P23497	879 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	MLH1	P40692	756 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	MTHFR	P42898	656 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	DSC1	Q08554	894 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	ZNF174	Q15697	407 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	PTPN21	Q16825	1174 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	MAEA	Q7L5Y9	396 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	PPFIBP1	Q86W92	1011 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	GSTCD	Q8NEC7	633 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	FBXO18	Q8NFZ0	1043 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	PBXIP1	Q96AQ6	731 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	ZFP42	Q96MM3	310 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	KLHL5	Q96PQ7	755 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	NACC1	Q96RE7	527 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	NXF3	Q9H4D5	531 aa	Known RBP	13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	GPRC5C	Q9NQ84	441 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	DZANK1	Q9NVP4	752 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	DBR1	Q9UK59	544 aa	Known RBP	13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	GIT1	Q9Y2X7	761 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173	NR2E1	Q9Y466	385 aa		13.87	□□□□□ -0.19
RAB4B-208	ENST00000602173		A0A1B0GUA9	196 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	C2CD4D	B7Z1M9	353 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	SSB	P05455	408 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	RPA1	P27694	616 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	SCNN1G	P51170	649 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	SIGLEC14	Q08ET2	396 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	ORC2	Q13416	577 aa	Predicted RBP	13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	ATAT1	Q5SQI0	421 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	KIAA1841	Q6NSI8	718 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	TAS1R1	Q7RTX1	841 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	CDR2L	Q86X02	465 aa	Predicted RBP	13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	RNF168	Q8IYW5	571 aa	Predicted RBP	13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	MCPH1	Q8NEM0	835 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	FEZF2	Q8TBJ5	459 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	ASIC4	Q96FT7	647 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	RIPOR3	Q96MK2	946 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	APOL6	Q9BWW8	343 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	TRIM6	Q9C030	488 aa	Predicted RBP	13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	TSHZ2	Q9NRE2	1034 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	MRPL17	Q9NRX2	175 aa	Known RBP	13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	CIT	O14578	2027 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	VWA8	A3KMH1	1905 aa		13.86	□□□□□ -0.19
RAB4B-208	ENST00000602173	LRRIQ4	A6NIV6	560 aa		13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	SOD2	P04179	222 aa		13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	OR1G1	P47890	313 aa		13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	RBM25	P49756	843 aa	Known RBP	13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	CLCN4	P51793	760 aa		13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	HMGN5	P82970	282 aa	Known RBP	13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	TTC38	Q5R3I4	469 aa		13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	SLC27A1	Q6PCB7	646 aa		13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	POTEG	Q6S5H5	508 aa		13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	PADI6	Q6TGC4	694 aa		13.85	□□□□□ -0.19
RAB4B-208	ENST00000602173	TMC5	Q6UXY8	1006 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms