RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SAAL1Q96ER3 474 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 WBP1LQ9NX94 342 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 ANKFY1Q9P2R3 1169 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 AGO2Q9UKV8 859 aaKnown RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 CLDN3O15551 220 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 EXTL3O43909 919 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 GYPCP04921 128 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 CASP14P31944 242 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 VAMP7P51809 220 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 TMEM132AQ24JP5 1023 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 NBPF20Q3BBV1 942 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 SRGAP1Q7Z6B7 1085 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 PPP1R13LQ8WUF5 828 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 PPP1R16BQ96T49 567 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 ACO2Q99798 780 aaKnown RBP19.61■□□□□ 0.73
VRK3-225ENST00000601912 TCHPQ9BT92 498 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 MSTO1Q9BUK6 570 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 KCNF1Q9H3M0 494 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 MMRN2Q9H8L6 949 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 SIK3Q9Y2K2 1263 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 USP20Q9Y2K6 914 aa19.61■□□□□ 0.73
VRK3-225ENST00000601912 ZNF233A6NK53 670 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 TREHO43280 583 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 CABYRO75952 493 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 HOXC8P31273 242 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 ADKP55263 362 aaKnown RBP19.6■□□□□ 0.73
VRK3-225ENST00000601912 LRMPQ12912 555 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 FAM187BQ17R55 369 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 FIGNQ5HY92 759 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 CCSAPQ6IQ19 270 aaPredicted RBP19.6■□□□□ 0.73
VRK3-225ENST00000601912 CBWD2Q8IUF1 395 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 NME8Q8N427 588 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 CCDC112Q8NEF3 446 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 CCDC51Q96ER9 411 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 PRIMPOLQ96LW4 560 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 FAM213AQ9BRX8 229 aa19.6■□□□□ 0.73
VRK3-225ENST00000601912 A0A0B4J269 797 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 MSNP26038 577 aaKnown RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 HIC1Q14526 733 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 TAF2Q6P1X5 1199 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 TSHZ1Q6ZSZ6 1077 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 CCDC155Q8N6L0 562 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 TC2NQ8N9U0 490 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 ZSWIM2Q8NEG5 633 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 NEK11Q8NG66 645 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 ZBTB45Q96K62 511 aaPredicted RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 GCOM2Q9BZD3 368 aaPredicted RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 MINDY3Q9H8M7 445 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 GTF2IRD1Q9UHL9 959 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 CAPN11Q9UMQ6 739 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 LUC7L2Q9Y383 392 aaKnown RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 GTPBP10A4D1E9 387 aaKnown RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 STX10O60499 249 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 N4BP1O75113 896 aaKnown RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 MFAP3LO75121 409 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 EDN1P05305 212 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 KLK7P49862 253 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 ZNF200P98182 395 aaPredicted RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 ENPEPQ07075 957 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 FAM47CQ5HY64 1035 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 ATF7IP2Q5U623 682 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 GBP6Q6ZN66 633 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 RUFY4Q6ZNE9 571 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 ZNF397Q8NF99 534 aaPredicted RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 TMC2Q8TDI7 906 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 DNAJB3Q8WWF6 145 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 MFSD14AQ96MC6 490 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 PANX2Q96RD6 677 aa19.59■□□□□ 0.73
VRK3-225ENST00000601912 FAM207AQ9NSI2 230 aaPredicted RBP19.59■□□□□ 0.73
VRK3-225ENST00000601912 SCN10AQ9Y5Y9 1956 aa19.58■□□□□ 0.73
VRK3-225ENST00000601912 A0A1W2PQJ5 194 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 TTC26A0AVF1 554 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 ADRB2P07550 413 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 TRIM49P0CI25 452 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 TRIM49CP0CI26 452 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 SKILP12757 684 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 FMO5P49326 533 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 FXR1P51114 621 aaKnown RBP eCLIP19.58■□□□□ 0.72
VRK3-225ENST00000601912 MCCD1P59942 119 aaPredicted RBP19.58■□□□□ 0.72
VRK3-225ENST00000601912 CYP24A1Q07973 514 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 GOLGA8FQ08AF8 430 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 GOLGA8DPQ0D2H9 430 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 KCNMA1Q12791 1236 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 CETN1Q12798 172 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 EXOC3L4Q17RC7 722 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 KIZQ2M2Z5 673 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 TSR1Q2NL82 804 aaKnown RBP19.58■□□□□ 0.72
VRK3-225ENST00000601912 VTI1AQ96AJ9 217 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 CRACR2AQ9BSW2 395 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 ADAMTS10Q9H324 1103 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 PTPN22Q9Y2R2 807 aa19.58■□□□□ 0.72
VRK3-225ENST00000601912 MOXD2PA6NHM9 499 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 GPR32O75388 356 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 ERLIN2O94905 339 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 KRT9P35527 623 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 MCL1Q07820 350 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 TMEM62Q0P6H9 643 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 PCBP1Q15365 356 aaKnown RBP eCLIP19.57■□□□□ 0.72
VRK3-225ENST00000601912 MPZL3Q6UWV2 235 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 SESTD1Q86VW0 696 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms