RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FKBP15Q5T1M5 1219 aa24.66■■□□□ 1.54
IRF3-228ENST00000601291 SPC24Q8NBT2 197 aa24.66■■□□□ 1.54
IRF3-228ENST00000601291 ADAMTS10Q9H324 1103 aa24.66■■□□□ 1.54
IRF3-228ENST00000601291 MINDY3Q9H8M7 445 aa24.66■■□□□ 1.54
IRF3-228ENST00000601291 STARD7Q9NQZ5 370 aa24.66■■□□□ 1.54
IRF3-228ENST00000601291 ANKFY1Q9P2R3 1169 aa24.66■■□□□ 1.54
IRF3-228ENST00000601291 GRIN2DO15399 1336 aa24.65■■□□□ 1.54
IRF3-228ENST00000601291 GPR32O75388 356 aa24.65■■□□□ 1.54
IRF3-228ENST00000601291 TOM1L1O75674 476 aa24.65■■□□□ 1.54
IRF3-228ENST00000601291 UBXN1Q04323 297 aa24.65■■□□□ 1.54
IRF3-228ENST00000601291 MIIPQ5JXC2 388 aa24.65■■□□□ 1.54
IRF3-228ENST00000601291 VSTM4Q8IW00 320 aa24.65■■□□□ 1.54
IRF3-228ENST00000601291 ACO2Q99798 780 aaKnown RBP24.65■■□□□ 1.54
IRF3-228ENST00000601291 NDST4Q9H3R1 872 aa24.65■■□□□ 1.54
IRF3-228ENST00000601291 GINS2Q9Y248 185 aa24.65■■□□□ 1.54
IRF3-228ENST00000601291 M0QZ92 97 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 TEX33O43247 280 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 ERLIN2O94905 339 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 EDN1P05305 212 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 PTMAP06454 111 aaKnown RBP24.64■■□□□ 1.54
IRF3-228ENST00000601291 KRT13P13646 458 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 PCBP1Q15365 356 aaKnown RBP eCLIP24.64■■□□□ 1.54
IRF3-228ENST00000601291 PTGISQ16647 500 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 INTS8Q75QN2 995 aaKnown RBP24.64■■□□□ 1.54
IRF3-228ENST00000601291 TMC6Q7Z403 805 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 SERINC5Q86VE9 423 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 GPD1LQ8N335 351 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 KIAA1586Q9HCI6 787 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 NOD1Q9Y239 953 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 USP20Q9Y2K6 914 aa24.64■■□□□ 1.54
IRF3-228ENST00000601291 CNTNAP2Q9UHC6 1331 aa24.64■■□□□ 1.53
IRF3-228ENST00000601291 HTTP42858 3142 aa24.64■■□□□ 1.53
IRF3-228ENST00000601291 A0A0U1RQG5 324 aaPredicted RBP24.63■■□□□ 1.53
IRF3-228ENST00000601291 CLDN3O15551 220 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 LDHAP00338 332 aaKnown RBP24.63■■□□□ 1.53
IRF3-228ENST00000601291 ATF7IP2Q5U623 682 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 TSHZ1Q6ZSZ6 1077 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 RDH13Q8NBN7 331 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 SAAL1Q96ER3 474 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 TCHPQ9BT92 498 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 SEZ6LQ9BYH1 1024 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 AGO2Q9UKV8 859 aaKnown RBP24.63■■□□□ 1.53
IRF3-228ENST00000601291 OGDHLQ9ULD0 1010 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 SNRNP35Q16560 246 aaKnown RBP24.63■■□□□ 1.53
IRF3-228ENST00000601291 DCAF17Q5H9S7 520 aaPredicted RBP24.63■■□□□ 1.53
IRF3-228ENST00000601291 TCERG1LQ5VWI1 586 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 BORCS6Q96GS4 357 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 FBXL18Q96ME1 805 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 OSMRQ99650 979 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 MSTO1Q9BUK6 570 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 IMPACTQ9P2X3 320 aa24.63■■□□□ 1.53
IRF3-228ENST00000601291 A0A0B4J269 797 aa24.62■■□□□ 1.53
IRF3-228ENST00000601291 GOLGA8IPA6NC78 632 aa24.62■■□□□ 1.53
IRF3-228ENST00000601291 GOLGA8JA6NMD2 632 aa24.62■■□□□ 1.53
IRF3-228ENST00000601291 EXTL3O43909 919 aa24.62■■□□□ 1.53
IRF3-228ENST00000601291 SPECC1LQ69YQ0 1117 aa24.62■■□□□ 1.53
IRF3-228ENST00000601291 ZNF333Q96JL9 665 aa24.62■■□□□ 1.53
IRF3-228ENST00000601291 TNFSF13BQ9Y275 285 aa24.62■■□□□ 1.53
IRF3-228ENST00000601291 A0A1W2PQC6 194 aa24.61■■□□□ 1.53
IRF3-228ENST00000601291 B4GALT5O43286 388 aa24.61■■□□□ 1.53
IRF3-228ENST00000601291 CSDE1O75534 798 aaKnown RBP24.61■■□□□ 1.53
IRF3-228ENST00000601291 IQCF3P0C7M6 154 aa24.61■■□□□ 1.53
IRF3-228ENST00000601291 DARSP14868 501 aaKnown RBP24.61■■□□□ 1.53
IRF3-228ENST00000601291 SFPQP23246 707 aaKnown RBP eCLIP24.61■■□□□ 1.53
IRF3-228ENST00000601291 CRYBB1P53674 252 aaPredicted RBP24.61■■□□□ 1.53
IRF3-228ENST00000601291 MRPS6P82932 125 aaKnown RBP24.61■■□□□ 1.53
IRF3-228ENST00000601291 NCBP1Q09161 790 aaKnown RBP24.61■■□□□ 1.53
IRF3-228ENST00000601291 BFSP1Q12934 665 aa24.61■■□□□ 1.53
IRF3-228ENST00000601291 AMHR2Q16671 573 aa24.61■■□□□ 1.53
IRF3-228ENST00000601291 MPZL3Q6UWV2 235 aa24.61■■□□□ 1.53
IRF3-228ENST00000601291 USP37Q86T82 979 aa24.61■■□□□ 1.53
IRF3-228ENST00000601291 RPAINQ86UA6 219 aa24.61■■□□□ 1.53
IRF3-228ENST00000601291 ZBTB45Q96K62 511 aaPredicted RBP24.61■■□□□ 1.53
IRF3-228ENST00000601291 TTLL13PA6NNM8 815 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 AFPP02771 609 aaKnown RBP24.6■■□□□ 1.53
IRF3-228ENST00000601291 EIF4BP23588 611 aaKnown RBP24.6■■□□□ 1.53
IRF3-228ENST00000601291 PBX1P40424 430 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 MCL1Q07820 350 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 PTK7Q13308 1070 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 NOLC1Q14978 699 aaKnown RBP eCLIP24.6■■□□□ 1.53
IRF3-228ENST00000601291 ZNF568Q3ZCX4 644 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 CBWD2Q8IUF1 395 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 SLC43A3Q8NBI5 491 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 SLC35C1Q96A29 364 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 ARMC5Q96C12 935 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 FAM213AQ9BRX8 229 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 CELF4Q9BZC1 486 aaKnown RBP24.6■■□□□ 1.53
IRF3-228ENST00000601291 TRPV2Q9Y5S1 764 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 ITIH6Q6UXX5 1313 aa24.6■■□□□ 1.53
IRF3-228ENST00000601291 ZNF233A6NK53 670 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 TSPAN1O60635 241 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 PROZP22891 400 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 KCNH2Q12809 1159 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 SNX17Q15036 470 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 CATSPER4Q7RTX7 472 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 ZSWIM2Q8NEG5 633 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 ARVCFO00192 962 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 HARSP12081 509 aaKnown RBP24.59■■□□□ 1.53
IRF3-228ENST00000601291 VAMP7P51809 220 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 PTPN21Q16825 1174 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms