RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	TCP11X1	B4DZS4	312 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	SLC37A4	O43826	429 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CSDE1	O75534	798 aa	Known RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CYP3A4	P08684	503 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	USP17L8	P0C7I0	530 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	KRT13	P13646	458 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	SLC9A1	P19634	815 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PTPN4	P29074	926 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CRKL	P46109	303 aa	Known RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	RPL21	P46778	160 aa	Known RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PEX5	P50542	639 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PAPOLA	P51003	745 aa	Known RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ARID5A	Q03989	594 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ZNF543	Q08ER8	600 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	SPRED3	Q2MJR0	410 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	EAPP	Q56P03	285 aa	Predicted RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	RC3H1	Q5TC82	1133 aa	Known RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	FYB2	Q5VWT5	728 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	MTHFD1L	Q6UB35	978 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	BRINP3	Q76B58	766 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ANKS1B	Q7Z6G8	1248 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ZNF677	Q86XU0	584 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CCDC105	Q8IYK2	499 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PPFIBP2	Q8ND30	876 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	MDM1	Q8TC05	714 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CABLES1	Q8TDN4	633 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ASAP3	Q8TDY4	903 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	KIFAP3	Q92845	792 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CD101	Q93033	1021 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	THOC1	Q96FV9	657 aa	Known RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ZNF570	Q96NI8	536 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TGS1	Q96RS0	853 aa	Known RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PITPNM3	Q9BZ71	974 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	VCX3B	Q9H321	246 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TMEM206	Q9H813	350 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PSTPIP2	Q9H939	334 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	VCX3A	Q9NNX9	186 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	AVEN	Q9NQS1	362 aa	Predicted RBP	12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	MTMR4	Q9NYA4	1195 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	SCOC	Q9UIL1	159 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ASB3	Q9Y575	518 aa		12.58	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TLDC2	A0PJX2	215 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	POTEM	A6NI47	508 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	DCDC2C	A8MYV0	355 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	POTEC	B2RU33	542 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	C2CD2L	O14523	706 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ATP2A1	O14983	1001 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	EXOC3	O60645	756 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	AKAP3	O75969	853 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TGDS	O95455	350 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CYP1A2	P05177	515 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	RPSA	P08865	295 aa	Known RBP	12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	BRAF	P15056	766 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	VHL	P40337	213 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	DRAP1	Q14919	205 aa	Predicted RBP	12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	LRRC41	Q15345	812 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TBCC	Q15814	346 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	FAM133B	Q5BKY9	247 aa	Known RBP	12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CWF19L1	Q69YN2	538 aa	Known RBP	12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	VSIG1	Q86XK7	387 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ATL2	Q8NHH9	583 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	DCAF4	Q8WV16	495 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	MIS12	Q9H081	205 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	SEMA4A	Q9H3S1	761 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	EHMT1	Q9H9B1	1298 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ABCF3	Q9NUQ8	709 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TBC1D7	Q9P0N9	293 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	DNAJC12	Q9UKB3	198 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PPP1R9A	Q9ULJ8	1098 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	SNX24	Q9Y343	169 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ZHX2	Q9Y6X8	837 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	GAK	O14976	1311 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CNTNAP4	Q9C0A0	1308 aa		12.57	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	LOXHD1	Q8IVV2	1947 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	WNK3	Q9BYP7	1800 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	USP17L3	A6NCW0	530 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	USP17L4	A6NCW7	530 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236		F8W8V4	182 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	IPO5	O00410	1097 aa	Known RBP	12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ADAMTS3	O15072	1205 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CCDC22	O60826	627 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ZPR1	O75312	459 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	RTN3	O95197	1032 aa	Predicted RBP	12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TDP2	O95551	362 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TROVE2	P10155	538 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	MARK3	P27448	753 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	GTF2H1	P32780	548 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	TNNI2	P48788	182 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	DNA2	P51530	1060 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	RNASE9	P60153	205 aa	Known RBP	12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	XIAP	P98170	497 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ARHGAP4	P98171	946 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	CBLB	Q13191	982 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PRPF4B	Q13523	1007 aa	Known RBP	12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	PDK4	Q16654	411 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	ACCSL	Q4AC99	568 aa		12.56	□□□□□ -0.4
U2AF1L4-221	ENST00000601236	SH2D4B	Q5SQS7	431 aa		12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms