RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 KCNG1Q9UIX4 513 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 TCHHQ07283 1943 aa17.86■□□□□ 0.45
LSM4-206ENST00000600289 ACKR2O00590 384 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 TECTAO75443 2155 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 BRD1O95696 1058 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 TXLNAP40222 546 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 FOXK2Q01167 660 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 MAPK6Q16659 721 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 PTPROQ16827 1216 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 SLC27A1Q6PCB7 646 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 USP49Q70CQ1 688 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 SPRYD3Q8NCJ5 442 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 PRSS33Q8NF86 280 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 SPIRE2Q8WWL2 714 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 MRPL38Q96DV4 380 aaKnown RBP17.85■□□□□ 0.45
LSM4-206ENST00000600289 EPSTI1Q96J88 318 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 CLIC6Q96NY7 704 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 PLIN2Q99541 437 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 NTPCRQ9BSD7 190 aaKnown RBP17.85■□□□□ 0.45
LSM4-206ENST00000600289 UBN1Q9NPG3 1134 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 AAASQ9NRG9 546 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 STK17AQ9UEE5 414 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 CCDC39Q9UFE4 941 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 ODF2LQ9ULJ1 636 aa17.85■□□□□ 0.45
LSM4-206ENST00000600289 CARNS1A5YM72 827 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 SPTLC2O15270 562 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 INPPL1O15357 1258 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 B4GALT5O43286 388 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 LAG3P18627 525 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 IBSPP21815 317 aaPredicted RBP17.84■□□□□ 0.45
LSM4-206ENST00000600289 NPTX2P47972 431 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 DMP1Q13316 513 aaPredicted RBP17.84■□□□□ 0.45
LSM4-206ENST00000600289 ARSHQ5FYA8 562 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 LRRC55Q6ZSA7 311 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 SMG8Q8ND04 991 aaKnown RBP17.84■□□□□ 0.45
LSM4-206ENST00000600289 RASSF8Q8NHQ8 419 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 HELQQ8TDG4 1101 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 LARP4BQ92615 738 aaKnown RBP17.84■□□□□ 0.45
LSM4-206ENST00000600289 CPB2Q96IY4 423 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 TMEM134Q9H6X4 195 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 TYW1Q9NV66 732 aaKnown RBP17.84■□□□□ 0.45
LSM4-206ENST00000600289 ARHGAP28Q9P2N2 729 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 RBM19Q9Y4C8 960 aaKnown RBP17.84■□□□□ 0.45
LSM4-206ENST00000600289 PLXNA3P51805 1871 aa17.84■□□□□ 0.45
LSM4-206ENST00000600289 PDCD11Q14690 1871 aaKnown RBP17.84■□□□□ 0.45
LSM4-206ENST00000600289 N4BP3O15049 544 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 OFD1O75665 1012 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 SSBP05455 408 aaKnown RBP eCLIP17.83■□□□□ 0.44
LSM4-206ENST00000600289 PRKCBP05771 671 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 SCP2P22307 547 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 DDIT3P35638 169 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 PEX3P56589 373 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 PRPF4BQ13523 1007 aaKnown RBP17.83■□□□□ 0.44
LSM4-206ENST00000600289 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 AGMOQ6ZNB7 445 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 COLGALT1Q8NBJ5 622 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 RNF169Q8NCN4 708 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 KCNG4Q8TDN1 519 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 LPPQ93052 612 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 EIF2AQ9BY44 585 aaKnown RBP17.83■□□□□ 0.44
LSM4-206ENST00000600289 CFAP45Q9UL16 551 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 IPPQ9Y573 584 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 PCDHB12Q9Y5F1 795 aa17.83■□□□□ 0.44
LSM4-206ENST00000600289 MEIS3P2A8K0S8 358 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 EDN1P05305 212 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 PLS3P13797 630 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 ZNF131P52739 623 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 UBE3AQ05086 875 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 TIGD5Q53EQ6 642 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 SPECC1Q5M775 1068 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 PTCRAQ6ISU1 281 aaPredicted RBP17.82■□□□□ 0.44
LSM4-206ENST00000600289 CCDC73Q6ZRK6 1079 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 HACE1Q8IYU2 909 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 REEP2Q9BRK0 252 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 KIFC3Q9BVG8 833 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 PDZD7Q9H5P4 517 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 RSAD1Q9HA92 442 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 POLD4Q9HCU8 107 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 KMT5AQ9NQR1 393 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 LARSQ9P2J5 1176 aaKnown RBP17.82■□□□□ 0.44
LSM4-206ENST00000600289 TFIP11Q9UBB9 837 aaKnown RBP17.82■□□□□ 0.44
LSM4-206ENST00000600289 PLAGL2Q9UPG8 496 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
LSM4-206ENST00000600289 CITO14578 2027 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 GRXCR2A6NFK2 248 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 K7ERI5 159 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 GRM6O15303 877 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 CUTAO60888 179 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 ITGB1P05556 798 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 ITGA4P13612 1032 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 KCNA5P22460 613 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 PPM1AP35813 382 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 PLCB3Q01970 1234 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 MCM6Q14566 821 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 NOMO2Q5JPE7 1267 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 FOXD4L5Q5VV16 416 aaPredicted RBP17.81■□□□□ 0.44
LSM4-206ENST00000600289 GPBP1Q86WP2 473 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 KLHL23Q8NBE8 558 aa17.81■□□□□ 0.44
LSM4-206ENST00000600289 FOXD4L4Q8WXT5 416 aaPredicted RBP17.81■□□□□ 0.44
LSM4-206ENST00000600289 TBC1D13Q9NVG8 400 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms