RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CPB2Q96IY4 423 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 EIF2AQ9BY44 585 aaKnown RBP17.52■□□□□ 0.4
VRK3-221ENST00000600284 TRIM6Q9C030 488 aaPredicted RBP17.52■□□□□ 0.4
VRK3-221ENST00000600284 GBP3Q9H0R5 595 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 FAN1Q9Y2M0 1017 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 HCFC2Q9Y5Z7 792 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 ARHGEF35A5YM69 484 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 FAM86C2PA6NEL3 165 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 LAD1O00515 517 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 POMCP01189 267 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 CYP11B2P19099 503 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 AFF1P51825 1210 aaKnown RBP17.51■□□□□ 0.39
VRK3-221ENST00000600284 ITIH3Q06033 890 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 FAM187BQ17R55 369 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 CDCA2Q69YH5 1023 aaPredicted RBP17.51■□□□□ 0.39
VRK3-221ENST00000600284 SLC27A1Q6PCB7 646 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 POTEGQ6S5H5 508 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 PADI6Q6TGC4 694 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 BCL7CQ8WUZ0 217 aaPredicted RBP17.51■□□□□ 0.39
VRK3-221ENST00000600284 RAB34Q9BZG1 259 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 C2orf40Q9H1Z8 148 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 UPF2Q9HAU5 1272 aaKnown RBP17.51■□□□□ 0.39
VRK3-221ENST00000600284 PRMT7Q9NVM4 692 aaPredicted RBP17.51■□□□□ 0.39
VRK3-221ENST00000600284 LRWD1Q9UFC0 647 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 HCN4Q9Y3Q4 1203 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 ZMYM2Q9UBW7 1377 aa17.51■□□□□ 0.39
VRK3-221ENST00000600284 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.5■□□□□ 0.39
VRK3-221ENST00000600284 ARL5CA6NH57 179 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 LRRIQ4A6NIV6 560 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 NRP1O14786 923 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 B4GALT3O60512 393 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 CA8P35219 290 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 MAEAQ7L5Y9 396 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 PPFIBP1Q86W92 1011 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 ZBTB8OSQ8IWT0 167 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 COLGALT2Q8IYK4 626 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 IGSF22Q8N9C0 903 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 ADAM7Q9H2U9 754 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 FZD8Q9H461 694 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 GPRC5CQ9NQ84 441 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 DZANK1Q9NVP4 752 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 RAPGEFL1Q9UHV5 662 aa17.5■□□□□ 0.39
VRK3-221ENST00000600284 B4GALT5O43286 388 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 NR1I2O75469 434 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 CCT6AP40227 531 aaKnown RBP17.49■□□□□ 0.39
VRK3-221ENST00000600284 PRPHP41219 470 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 NAMPTP43490 491 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 MCM2P49736 904 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 TOB1P50616 345 aaPredicted RBP17.49■□□□□ 0.39
VRK3-221ENST00000600284 DSC1Q08554 894 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 PTGDRQ13258 359 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 PPP2R5AQ15172 486 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 PTPN14Q15678 1187 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 CES5AQ6NT32 575 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 GAD1Q99259 594 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 VN1R3Q9BXE9 311 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 MUTYHQ9UIF7 546 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 SSX2IPQ9Y2D8 614 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 HES2Q9Y543 173 aa17.49■□□□□ 0.39
VRK3-221ENST00000600284 SOD2P04179 222 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 MLH1P40692 756 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 NBR1Q14596 966 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 SLC22A17Q8WUG5 538 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 AUTS2Q8WXX7 1259 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 EDAQ92838 391 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 RPGRIP1Q96KN7 1286 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 EMILIN2Q9BXX0 1053 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 PCDHB6Q9Y5E3 794 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 C5orf42Q9H799 3197 aa17.48■□□□□ 0.39
VRK3-221ENST00000600284 ACKR2O00590 384 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 LILRB3O75022 631 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 NPTXRO95502 500 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 EFEMP2O95967 443 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 OR1G1P47890 313 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 SCNN1GP51170 649 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 ECM1Q16610 540 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 MAPK6Q16659 721 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 RILPL1Q5EBL4 403 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 KIFAP3Q92845 792 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 IFT74Q96LB3 600 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 RIPOR3Q96MK2 946 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 COLEC11Q9BWP8 271 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 NXF3Q9H4D5 531 aaKnown RBP17.47■□□□□ 0.39
VRK3-221ENST00000600284 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.47■□□□□ 0.39
VRK3-221ENST00000600284 MRPL17Q9NRX2 175 aaKnown RBP17.47■□□□□ 0.39
VRK3-221ENST00000600284 MIOSQ9NXC5 875 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 KIAA1024Q9UPX6 916 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 NR2E1Q9Y466 385 aa17.47■□□□□ 0.39
VRK3-221ENST00000600284 N4BP3O15049 544 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 MTHFRP42898 656 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 EFNA5P52803 228 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 PRPF4BQ13523 1007 aaKnown RBP17.46■□□□□ 0.39
VRK3-221ENST00000600284 KRT79Q5XKE5 535 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 DTHD1Q6ZMT9 781 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 GPR65Q8IYL9 337 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
VRK3-221ENST00000600284 KCTD17Q8N5Z5 321 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms